Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03072 ATGGTTTCTTCAGACAAAAGTGTAGATCAAAATACCCCTTCTGGTAAATTGCTGCAGCATAGAGCCAGTCCTGATAGTGATGTTACATTGTCACAAGGTCATGATACTAAAAATGATCCTTCCAAACCAGAGGGAGCAACAAGTTCTCCTTCTGCTGTAGTTAAAAATGAAGAGGGGAAGGACTCCGATGCTACTGCATGTGCCCTGGAATCAGATCAAGAAGGAAGCACGTGCTCATTACCACCTGAGAAACATTTGCAGAGCCCTGATACTCTTTTGAATGAATTGCCTCCATTGCAATCCAGTCAAGAAAGTCCCTCTATAATACGTGAAAAGGTGTCTAAAGATGGCTATAACTGGCGAAAATATGGTCAGAAACATGTCAAGGGGAATGAATTTATACGGAGCTATTACAAGTGTACATATCCAAATTGCCAGGCAAAAAAGCAATTGCAGCAGTCTAATAATGGGAACATCACCGATTGTGTTTGTATCGGACAGCATAATCATCCTAGGCCTCAATTGAACTCCACAGTATCAGTTGAGTGTGTTTTTCCGGTTGTTGAACAAGCAGCACGCAAACCCTTGTTAGCCAATGTGAAAGACAAAACATCCGTTGAGCAAGGATGCACGTCTCAACAGATCAAGCCTTTACAGTCCTTTCCGACTGCAAAAGTGTCCCCAGTTATTGAGTTGAAAGCTGCACATTTACAATTGTCAAAGGCAAAGAATCAGGTTCATGACAACGAGGATCCTGAGTCAAAGCGACAGAAGAAAGACAGTAGTAATGCTGATTCCATTGGAGTTAACATGTCAACTCGTGAATCTCGTGTTGTTGTTCAGACTTCAAGTGAGGTTGATTTGGTAAATGATGGGTATCGCTGGCGCAAATATGGGCAGAAGCTAGTTAAAGGGAATGCAAACCCAAGAAGTTACTATCGATGCTCAAATCCTGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATTCAAAAATTGTAATAACTACCTATGAGGGACAACATGATCATGAACTTCCCCCTGGAAGGACTGTCACTCATAATGCAGCTACAAATACTCACACAACGACCATGAATGGCAAGGCAGGAACCGAATCTGAAGATACTGCTGTTAACAGAGGGGAACAAAGTGGCTTGGGCTCGGCAAGCAAATTATCAGAGCAACTAAATGGCAAGTCAACTACTAAGTCAAAGGTCCGTGATATGGTTCAGTTTAGTGTGATAAGCCTTTCAAATGAGGGTCCTGAAGTTAAATTAAATGAGCAACAACAAAAAGATAACTCAGGTACCAAAGACGATTCTGTCAGCAGTGATGTTATATGCAATTCTAGTTCTGGAGTTCCGTGTAGATCCAATGAACAGCTGAAAAGTGAGGTAAAACCTTTATCAGAAGGAACTAAGGCCATTCATGATAACCCCAGTACAGAAAGCGAATTTAACAAGCAACCAGCAGCTGATGCAGAACCGGTCCAAAGCTAA 1506 0.4216 MVSSDKSVDQNTPSGKLLQHRASPDSDVTLSQGHDTKNDPSKPEGATSSPSAVVKNEEGKDSDATACALESDQEGSTCSLPPEKHLQSPDTLLNELPPLQSSQESPSIIREKVSKDGYNWRKYGQKHVKGNEFIRSYYKCTYPNCQAKKQLQQSNNGNITDCVCIGQHNHPRPQLNSTVSVECVFPVVEQAARKPLLANVKDKTSVEQGCTSQQIKPLQSFPTAKVSPVIELKAAHLQLSKAKNQVHDNEDPESKRQKKDSSNADSIGVNMSTRESRVVVQTSSEVDLVNDGYRWRKYGQKLVKGNANPRSYYRCSNPGCPVKKHVERASHDSKIVITTYEGQHDHELPPGRTVTHNAATNTHTTTMNGKAGTESEDTAVNRGEQSGLGSASKLSEQLNGKSTTKSKVRDMVQFSVISLSNEGPEVKLNEQQQKDNSGTKDDSVSSDVICNSSSGVPCRSNEQLKSEVKPLSEGTKAIHDNPSTESEFNKQPAADAEPVQS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03072 501 ProSiteProfiles WRKY domain profile. 284 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g03072 501 MobiDBLite consensus disorder prediction 423 501 - -
Viun8g03072 501 SUPERFAMILY WRKY DNA-binding domain 110 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g03072 501 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 64 366 IPR044810 GO:0003700
Viun8g03072 501 FunFam WRKY transcription factor 57 275 349 - -
Viun8g03072 501 Pfam WRKY DNA -binding domain 290 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g03072 501 Pfam WRKY DNA -binding domain 115 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g03072 501 SUPERFAMILY WRKY DNA-binding domain 281 349 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g03072 501 Gene3D WRKY domain 276 342 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g03072 501 MobiDBLite consensus disorder prediction 354 406 - -
Viun8g03072 501 MobiDBLite consensus disorder prediction 1 108 - -
Viun8g03072 501 Gene3D WRKY domain 103 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g03072 501 ProSiteProfiles WRKY domain profile. 109 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g03072 501 MobiDBLite consensus disorder prediction 69 84 - -
Viun8g03072 501 MobiDBLite consensus disorder prediction 93 108 - -
Viun8g03072 501 FunFam WRKY transcription factor 101 174 - -
Viun8g03072 501 SMART WRKY_cls 114 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g03072 501 SMART WRKY_cls 289 348 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g03072 501 MobiDBLite consensus disorder prediction 1 55 - -
Viun8g03072 501 MobiDBLite consensus disorder prediction 344 406 - -
Viun8g03072 501 MobiDBLite consensus disorder prediction 442 468 - -
Viun8g03072 501 MobiDBLite consensus disorder prediction 241 276 - -
Viun8g03072 501 MobiDBLite consensus disorder prediction 243 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03072 Viun-Chr8 37753486 37757324 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03072 99 371 WRKY Transcription Factor Family AT2G04880 50.179 8.95e-85 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun8g03072 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03072 K18834 - gmx:100781219 788.104