Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03071 ATGCAGGCATCAGAGCAACATAGAAGTTCAAGCATGTACTATCAACCATTACAACAAATTGAAGCCTATTGCTTGCCGCAGTATCGCACCCTTAATCAGCAGCTATTTTACCATGATGGAGGCCATGGAACTCACTTTTCAACTCCAAGTTCTTCTGAACTTTACTGTACATTGGAATCATCTTCTGTAGCTGGCAGTTTCACTCTTTACAACTCTCCTTCAACTCTTAGTTTCTCACCTAATGGTAGCCCCATATCGCAGCATGAGTCTCAGTCATATCCTTCTGATCAGTATCATTCCCCTGAGAATACCTATGGCTCTCCATTGAGTGGCTCCTGCATAACCGATGATTTAAGCAGCTTCAAGCACAAACTGAGAGAGTTGGAAAGTGTGATGCTTGGCCCTGACTCTGATAATCTTGATTGTTATGACAGTGCCATAAGCAATGGAAACAACTTTGCTTCACTTGAGATGGATAGCTGGAGACAAACAATGGTGGCAATTTCTAGCAAAAACCTGAAGCACATCCTTATTGCATGTGCCAAAGCCATTGCAGACAATGATTTGCTCATGGCACAGTGGCTGATGGATGAACTAAGGCAGATGGTGTCAGTTTCTGGCGACCCAATTCAACGGTTGGGAGCATACATGCTGGAAGGACTTGTTGCAAGATTAGCTGCTTCTGGGAGTTCAATATACAAAGCTTTAAGATGCAAAGAACCAGAAAGTTCTGAGCTTCTCTCCTACATGCACATACTGTATGAGGTTTGCCCTTATTTCAAATTTGGGTACATGTCTGCAAATGGAGCCATTGCAGAAGCTATGAAAGATGAAGAAAGGGTGCACATAATTGATTTCCAAATTGGTCAAGGAAGCCAGTGGATCACTTTAATTCAGGCTTTTGCAGCTAGACCTGGAGGGCCACCCCACATTCGGATTACAGGTATTGATGACTCACAATCAGCTTATGCTAGAGGTGGTGGACTGCACATAGTGGGAAGGAGGTTATCAAAGCTTGCTGAGCATTTTAAGGTGCCGTTTGAGTTTCATGCTGCAGCTATTTCTGGTTGTGATGTTCAACTACATAACCTTGGAGTTCGACCGGGGGAAGCTCTGGCTGTGAATTTTGCATTCATGCTACATCATATGCCAGATGAAAGTGTGAGTACACAGAATCACAGGGATAGGTTGTTGAGGTTGGTTAGGAGCCTATCGCCGAAGGTGGTGACACTTGTTGAGCAGGAATCTAACACAAACACTGCTGCATTCTTTCCTCGTTTCCTTGAAACTCTGGACTATTACACAGCAATGTTTGAGTCAATAGATGTGACTCTTCCTAGAGATCATAAAGAGAGAATCAATGTTGAGCAGCATTGTTTGGCGAGAGATTTGGTTAACATCATAGCTTGTGAAGGGGTTGAGAGGGTGGAACGGCATGAGGTGCTTGGGAAATGGAGATCAAGATTTGCAATGGCCGGTTTCACTCCTTACCCTTTGAGTTCACTGGTGAATGGTACCATTAAGAAATTGCTTGAGAACTACAGTAATAGATATAGACTTGAAGAGAGAGATGGAGCTCTTTATCTGGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCATGGAAATGA 1632 0.4344 MQASEQHRSSSMYYQPLQQIEAYCLPQYRTLNQQLFYHDGGHGTHFSTPSSSELYCTLESSSVAGSFTLYNSPSTLSFSPNGSPISQHESQSYPSDQYHSPENTYGSPLSGSCITDDLSSFKHKLRELESVMLGPDSDNLDCYDSAISNGNNFASLEMDSWRQTMVAISSKNLKHILIACAKAIADNDLLMAQWLMDELRQMVSVSGDPIQRLGAYMLEGLVARLAASGSSIYKALRCKEPESSELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEERVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSQSAYARGGGLHIVGRRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVRSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFESIDVTLPRDHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSNRYRLEERDGALYLGWMNRDLVASCAWK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03071 543 ProSiteProfiles GRAS family profile. 164 543 IPR005202 -
Viun8g03071 543 Pfam GRAS domain family 173 543 IPR005202 -
Viun8g03071 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 146 537 IPR005202 -
Viun8g03071 543 MobiDBLite consensus disorder prediction 78 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03071 Viun-Chr8 37749050 37752369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03071 12 543 GRAS Transcription Factor Family AT5G48150 67.103 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun8g03071 GRAS 2.3e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03071 - - gmx:100808300 1038.87