Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03056 ATGTCCATAGAAAGCATGTCCTCAGCTGGTGGTGATGGTGATGGTGGTGCCAGCATTGAACTTGGTGCTTCCTTACTTGGTTCTACTACCAAGGGGAAGTACAACAGGATATGGCGTAAGAGTTTATACATAAGGTTCCTCATCTCCGTCAAGAAGCCATCAACTTCCGGTGGCAACCATGAGTCTCTGCCATCACCACCATCTCCTGCTAGTAGAACTTCCTCTTCCAAATCCTATGTCACAGTTGATATAGAAGAGTGCATTAGCAGTGATACTGATGGAATTGTGAAGGAGCAGGACTTGAATTCTCTTTCTGGGCTTGGGGGTCAACGTCAACGCACACAGGAGCGCGGTGTTGTTGATGAGGGGAACCCCACTGTACGGTTACCAGTTCTTGGAATAGACTTTTCCAAGTCTTTATTGAAGAGCTACAAATGCAACGGTTGCACAATTTTGATGCTGTTGGTCTCGGCTGGGTTGTCATTCGCCATAGGCTTCAAGCAGGAGGGACCTAAACATGGTTGGCATGATGCTGTTGCTATACTGTTTGCTCTTCTCCTGCTGGTTCTGGGAAAACCATTTGCAAACTTTTTGTGTGAGAGGAAAAGGTTGAAATTGAAGGAGAGAAAGCACGAGTTGAAATCCATAGTGAAGCGAGGTGAAAAGACGCTAAGGGTTTCCGTATCTGATATTCAGGTGGGAGAAACGGTGTGCTTGTGGCCAGGCGATGAGGTTCCGGCAGATGGTGAACTTGAAAGTGATGGCATCCTTGTGGTGGAGGAGTTTGGGGTAAGGAAAATCAAACAGAAGGGGAAGGATTCGTTTCTTGTAGCTGGTTCAAAGGTGATCGGGGGCCAGGGAAGGATGTTGGTAACATCGGTTGGAACCAAAACCAATTCTGAGAGGAAGGGTTTGTTGGAAAGACAAATTGAGAAGCCAATTTCTTACATTGACATGGCTGCACTTTTTATCTCTGTAGTGGTTGCATTTGTGGTGTTGATTCGCCTAATTTGTGGAAAAGATGGGAGCAATGCAGGGTTGCCAGAAATTAAGGGGAAGGTCTCAATTGGCGTGCTGATGAAAGTCCTTGAGAGAATTTTTCTGAGACCCCAAGGAAGGGTTTCAATTTTGACAGGTCTTGTTACTGTTGCAATACTTTGCGTTCAGCATGGAATGCCGCTTGTGGTTACAATTTCTCTCAAGTACCAGATTGAAAAGGAAGTGCAAAGCCAAGATGTAGTTCTTAATGATTTGTCCGCTTGTACGACAATGGGGTTGGTAACTGTCATCTGTGTTGATGTATCAGGGGAGCTTGTATCTAAACAAATGGAGGTTAGCAGAATATGGATGGGAGAGGAATATATCAGCATGGTTGAGGGATCAGAAATAGAAAAACCTGTTCTTGACATGCTTAAACTGGGGGTTGGTTTATCAGTCCTTGCACCAGAGATTTATCTTTCCCCTCTGTTCAATTCACTTGTTTCTTGGGCAGAAACAACATGGGAAATGAGCATGAGATCTTTCACAGAAGAAAAATTTGATATTCTTAAGCACAGCAAATTGGATTCTGGCAAAGAAGGCAGTGGAGTTTTGGTGAGAAAAATTGGGGACAGTGAAGTTCTGCACTTGCACTGGAGTGGAGCAGCATCTGAAATTTTGGAGATGTGTTCACAATACCATGACAGTAAAGGGAATTGCCACGCCATGGAAAACCAGAAAATAAAATTTGGGAAGGTGATTAAACAGATGGAGGATAGTGGTCTTAGGTCAATTGCTTTTGCATATAAACAAACAGATGGAGAAGAACTTGAGCAAGAAGAACTGATCTTGTCAGGACTGATAGGCCTGAGAGAAACTAGTCAAGAATCCATAAAATCAGCTTTGGAAAATTTCAGAACTGCTGCAAATGTACAGATCAAACTGGTCTCGGAGGATGGCATCGAGAAATTGGAAGGAATTGCTCGTGAACTGGGACTAGAACATGGTGTTGTGCTAGAAGGTAAACAACTTCAGGATTTGAATGAGGAAGCTAGACTGGTCGAAGTGGATCGAGCCCATGTAATGGCAAAATTCCTTCCTGAGGACAAACTTCTCTTGATACAGTGCTTGCAAAAGAGAGGCATGGTGGTTGCATTCACTGGGACAAGGTTGATAACTAGTTTAACTTCAATTCTAAAAGTAGCTGATGTGGGGATAGTGCTTGATTCTTTGGATAGAGATAGTTGTGACATATCTATGAAATGCTTCAGTGCATTGGAACCTGTTGTGATAGCTGGCAGAAGTAAATACCACAATATTCAGAAGTTCATTCAACTTCAGTTGACATGTACCATATCAGGATTAGTCATAACCTTGATCACAACCTGTACTGGAGATTCCCCGCTTGCACCGTTCCAGTTGATTTGGGTGAATGTTTTTGTGTGCATTCTGGGTGGCCTAATGATGGTAATGAAGTTAACCAGCGAGGAAGAACTTGTTAAACAACCATCTGATGACAGGAACCAAAACATTATAGCCAAAGAAATCTGGAAAAGCATTGTGATTCAGGTACTATATCAGACTTGTGTATCAATGATACTTGAGTTTGGGGGACATGTTACTGACAGGGAGAAAAAAGTTCGGGAAACCATGATCTTTAACACCTTCTTGTTGTGCCAAATCGTCAATCTGCTCAACACCATGAAGTTGTTGAGAAAGGAAGTTCTTGTTCAGAGCTTGTATTTCTTGGGGGCCTTAGTTATCTGTTTTGCAATGCAAGTGGTGGTGATTGAGTATGCTAAAGGCCTATCAGATTGCATGCACCTGAATGCTACGAGATGGGGTATCTGTGTCATGATTGCTGCTCTTCCATGGGTTCTTGAGTGGAGCATGAAGAATATTCTTCCAGTTATTCTGAATTCCAGCACCAGTTATTCTTCAGAATCCAGTGCATGGTTTACCAGGTTTGCCTCAAAAAAAAGGGTCTATGAAGTTTCACTACAAAGTATTTTTCTTCTTTTGTGA 3003 0.4286 MSIESMSSAGGDGDGGASIELGASLLGSTTKGKYNRIWRKSLYIRFLISVKKPSTSGGNHESLPSPPSPASRTSSSKSYVTVDIEECISSDTDGIVKEQDLNSLSGLGGQRQRTQERGVVDEGNPTVRLPVLGIDFSKSLLKSYKCNGCTILMLLVSAGLSFAIGFKQEGPKHGWHDAVAILFALLLLVLGKPFANFLCERKRLKLKERKHELKSIVKRGEKTLRVSVSDIQVGETVCLWPGDEVPADGELESDGILVVEEFGVRKIKQKGKDSFLVAGSKVIGGQGRMLVTSVGTKTNSERKGLLERQIEKPISYIDMAALFISVVVAFVVLIRLICGKDGSNAGLPEIKGKVSIGVLMKVLERIFLRPQGRVSILTGLVTVAILCVQHGMPLVVTISLKYQIEKEVQSQDVVLNDLSACTTMGLVTVICVDVSGELVSKQMEVSRIWMGEEYISMVEGSEIEKPVLDMLKLGVGLSVLAPEIYLSPLFNSLVSWAETTWEMSMRSFTEEKFDILKHSKLDSGKEGSGVLVRKIGDSEVLHLHWSGAASEILEMCSQYHDSKGNCHAMENQKIKFGKVIKQMEDSGLRSIAFAYKQTDGEELEQEELILSGLIGLRETSQESIKSALENFRTAANVQIKLVSEDGIEKLEGIARELGLEHGVVLEGKQLQDLNEEARLVEVDRAHVMAKFLPEDKLLLIQCLQKRGMVVAFTGTRLITSLTSILKVADVGIVLDSLDRDSCDISMKCFSALEPVVIAGRSKYHNIQKFIQLQLTCTISGLVITLITTCTGDSPLAPFQLIWVNVFVCILGGLMMVMKLTSEEELVKQPSDDRNQNIIAKEIWKSIVIQVLYQTCVSMILEFGGHVTDREKKVRETMIFNTFLLCQIVNLLNTMKLLRKEVLVQSLYFLGALVICFAMQVVVIEYAKGLSDCMHLNATRWGICVMIAALPWVLEWSMKNILPVILNSSTSYSSESSAWFTRFASKKRVYEVSLQSIFLLL 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03056 1000 Gene3D - 441 457 IPR023299 GO:0000166
Viun8g03056 1000 Gene3D - 747 962 - -
Viun8g03056 1000 Pfam E1-E2 ATPase 217 400 - -
Viun8g03056 1000 Gene3D - 491 612 IPR023299 GO:0000166
Viun8g03056 1000 SUPERFAMILY Calcium ATPase, transduction domain A 215 299 IPR008250 -
Viun8g03056 1000 Pfam Cation transporting ATPase, C-terminus 793 958 IPR006068 -
Viun8g03056 1000 FunFam - 749 968 - -
Viun8g03056 1000 SUPERFAMILY Calcium ATPase, transmembrane domain M 148 962 IPR023298 -
Viun8g03056 1000 PANTHER CATION TRANSPORTING ATPASE 145 960 - -
Viun8g03056 1000 SUPERFAMILY HAD-like 429 811 IPR036412 -
Viun8g03056 1000 Gene3D - 356 427 - -
Viun8g03056 1000 Gene3D - 428 440 IPR023214 -
Viun8g03056 1000 MobiDBLite consensus disorder prediction 53 77 - -
Viun8g03056 1000 Gene3D - 190 304 - -
Viun8g03056 1000 Gene3D - 613 746 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03056 Viun-Chr8 37675320 37679340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03056 93 979 Primary Pumps ATPases AT3G63380 32.441 2.01e-129 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03056 K01537 - gmx:102661547 1206.43