Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03043 ATGGAAGCGAACAAGGAGGAAGCACTTAAAGCGATAGAGATTGCTGAAAAGCGATTTGCTGTGAGAGACTTTGCAGGTGCAAAAAACTATGCTGTAAAGGCTAGAACACTTTGTCCAGGATTGGAGGGTATATCTCAAATGGTGGCCACGTTTGAAGTTTACATTGCTTCTGAGGTCAAACATAATGGTGAGCTAGATTACTATTCGATTCTTGGATTAAAACCTTTTGCAGATAAGGAGGCTGTGAAGAAACAGTACAAGAAGTTGGCGGTGTTGCTTCACCCAGATAAGAACAAGTGTGTGGGAGCTGACGAGGCATTTAAGCTTGTTTCTGAGGCTTGGACTTGGCTATCAGATAGTGCTATGCGCAGTTCTTATGATCTCAAGAGAAATGCGCAGTTGGGTGGGACTAACCAGATGAATCTGTCTCCTGCCCTTGCTACAGGGGCTGCAGGTTATAACAAATGTTCCAATTTGTCAACCCCTCGTGGTGGGCTTGACACCTTTTGGACAATCTGCACCTCTTGTAAGGTTCAGTACGAGTATCTGCGCAAGTACGTGAATAAAAGACTATCTTGTAAGAACTGCCGTGGCACTTTTGTGGCTGTCGAAACTGGGGCGGCCCCAGCAAACGGTTCATTTCCATATTGTCCTTGGTCATATGTGCCGGGAAATGGGTATGGAAGTCATTCATTTGATGGTGTCTCATATGTTCCAACCAGTGCCCCCTATTTCAATGGGAATGGGGTTGCAGGATATCATTCTGGCCATGGATATGAGTACGTTCCAAATGTTTCATTTCAGTGGGGCTCTGCTGGAGTTGTTAATCAAAACGGATCACCTGCATTACCTGCTGATTCAGTCAATCGGGCAAATGGAAATGTGAAGAGGGGAAGACCAAAACTCAAAACAGGAGCTGATAAGAGGCATCATGTAGCAGAGACCATGGTGAATACAAATTCAGATGTACCGTTCTCCTATAGTGAACCACAGGAAGATAAACTAAGTAGACCTGACAAAAAACAGAAAGTTGTTGTGGGAGGCACTTTCAGAAATGGCTACGAAGAAAAGGGTTCCAAATGTGGTCTAGAGTCAATAGTGTCTAACGGAAATGATAGCACTGGACACGGCCAAAAGCCTTCTGGCGCAGTTGAAGTTCAAACCAAACATTGCTCCATGGCACCGGCATTTGATGCAAGAAAATTATTGATTGAGAAAGCCAGGACAGTAATCAGGCAGAAACTGGAGGAGATCAAGCTGTCATCCGAAGCAGAAGCAGCAGCTGCTGCTGCTCTGAAAGAGAGAGAAAAATCTCAAGCTCAAGTTGGTCTAGTAAAAAGAGAGACTTGTAGAAAAACAGCCCTGAATGTTTCTGGTCTACAGCTAGAGAATGGGAAACCTGGTCCAATCTCAATTACTGTCCCAGATTCTGACTTTCATGACTTTGATAAAGATAGGTCAGAGGAATGCTTCAGGCCAAAGCAAATATGGGCCCTGTACGATGAGGAAGATGGAATGCCACGGTTGTATTGTATGATCCGTGAGGTTGTGACTGTCAATCCATTCAAGATTCACATCAGTTACCTGAGTTCCAAAACTGATAGCGAGTTTGGCCCAGTAAACTGGCTGGATTCAGGTTTTACGAAATCTTGTGGAAATTTCAGGGCCTTTAATTCAGATGTTGTTGATCAGGTTAACATATTTTCTCATGTTCTAAGTCAGGAGAAGGCTGGTCGAGGGGGTTGTGTCCGCATATATCCCAGAAGTGGAGATATTTGGGCCGTGTATCGAAATTGGTCACCGAATTGGAACAGATCTACACCAGATGAAGTGAGGCATCAGTATGAAATGGTTGAGGTGCTGGATGATTACTCTGAGGAACTTGGTGTTTGTGTTAGTCCCCTTGTTAAGTTGGCTGGATTTAAAACAGTATATCAGAGTAATAGCGACAAGAGTGCCATAAAATGGATACCCAAAAGAGAGATGTTGCGGTTTTCTCATCAAGTGCCTTCTTGGTTGCTGAAGGGGGAAGCCGAGAATTTACCAGAAAGGTGTTGGGACCTGGATCCGGCTGCCACTCCAGATGAGCTTCTTCATGCTGCTGCCACTGCTACAGAAGAACCAAACGCTTTGTAG 2136 0.4457 MEANKEEALKAIEIAEKRFAVRDFAGAKNYAVKARTLCPGLEGISQMVATFEVYIASEVKHNGELDYYSILGLKPFADKEAVKKQYKKLAVLLHPDKNKCVGADEAFKLVSEAWTWLSDSAMRSSYDLKRNAQLGGTNQMNLSPALATGAAGYNKCSNLSTPRGGLDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFVAVETGAAPANGSFPYCPWSYVPGNGYGSHSFDGVSYVPTSAPYFNGNGVAGYHSGHGYEYVPNVSFQWGSAGVVNQNGSPALPADSVNRANGNVKRGRPKLKTGADKRHHVAETMVNTNSDVPFSYSEPQEDKLSRPDKKQKVVVGGTFRNGYEEKGSKCGLESIVSNGNDSTGHGQKPSGAVEVQTKHCSMAPAFDARKLLIEKARTVIRQKLEEIKLSSEAEAAAAAALKEREKSQAQVGLVKRETCRKTALNVSGLQLENGKPGPISITVPDSDFHDFDKDRSEECFRPKQIWALYDEEDGMPRLYCMIREVVTVNPFKIHISYLSSKTDSEFGPVNWLDSGFTKSCGNFRAFNSDVVDQVNIFSHVLSQEKAGRGGCVRIYPRSGDIWAVYRNWSPNWNRSTPDEVRHQYEMVEVLDDYSEELGVCVSPLVKLAGFKTVYQSNSDKSAIKWIPKREMLRFSHQVPSWLLKGEAENLPERCWDLDPAATPDELLHAAATATEEPNAL 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03043 711 MobiDBLite consensus disorder prediction 283 307 - -
Viun8g03043 711 SMART dnaj_3 65 122 IPR001623 -
Viun8g03043 711 Pfam DnaJ domain 66 127 IPR001623 -
Viun8g03043 711 SUPERFAMILY Chaperone J-domain 59 131 IPR036869 -
Viun8g03043 711 Gene3D DnaJ domain 55 147 IPR036869 -
Viun8g03043 711 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Viun8g03043 711 Coils Coil 421 441 - -
Viun8g03043 711 MobiDBLite consensus disorder prediction 321 342 - -
Viun8g03043 711 CDD DnaJ 66 119 IPR001623 -
Viun8g03043 711 PANTHER BNAC03G44070D PROTEIN 1 694 - -
Viun8g03043 711 Pfam Domain of unknown function (DUF3444) 471 677 IPR024593 -
Viun8g03043 711 PRINTS DnaJ domain signature 86 101 IPR001623 -
Viun8g03043 711 PRINTS DnaJ domain signature 102 122 IPR001623 -
Viun8g03043 711 PRINTS DnaJ domain signature 68 86 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03043 Viun-Chr8 37576701 37580094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03043 4 301 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.556 2.51e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03043 - - vun:114194067 1413.28