Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03038 ATGTCTTCTACTTCTTCTTCTTCTTCTTCCTCGTCATCATCGTCATCATCAACTTCAGCCCCGTATGACGCTGTTGCTGCTCCTGATATCCCAGGACCTAGTACGAGGAGAACCGCGCAATTTGAAGGCCCTTCCTCCTCTCGACAACGTGCTATGAATGAGGTCTTGCCTGAGCCTTTTCTTGAGGCTTTGGCCAACCAACTCGCCATTGATGCTGCCAACTACAATGGTCGTCTTGCTGCTGCTCCTGCACTTGCCAATTTGTTTCAGGTTTGTTCCACGTGGCGGGAGGTGTCGCGCTCGGATCTGCTGTGGGAGCACCTCACGAGGCGCATCTGGCGAAGGACGTTCCGGGTGAGGGACACGTGGCACAGCGACTACATCAACTGGCATCGGACGGCTACCAACTTCGAGACTGGAAGGCTGTCGTTTCTGACTCCGCGCTTCGATCCCTCGGAGCATCGCCGGGGCTTGATCTGCCGCTGCCTCTCGCTTTCCGACACCCGCCTGGCGTGCGGCTTCATAGACGGAACCGTGCGGGTCTTCGACCTCGAAACCTACGACCACGTCAGCACCTACCTCTCCGACCACGGCCCACTCTTCGGGCCCTACTCGCGCTCTGTGTCGGGAATCGTTATCAGCGACTCCGACATCACCTTCGCCAGGCTCGACGGGGATATCTACGTGGACGCTATCAACGTGCATGGGCAGAGCCAGGCGCGGCGCGCCGTGTCGGGGTTCGTGATGAACAACGGGGTCTTGGTGGGGTTCGCGGGAACGCGGCGGCGGTGGGTGGGCCTGTTCGCGGGGATCGCGGGTGGCGCATTCCAGGTGTGGAACGCGGAGAGCGGGGAGCGCGTGTTCGTCGGGGGGTCGTTGACGGATCCGGAAACGGTTATGGGGTGGCACATGCTGACGGAGTTGGTTGACCCGGTGGGGCGGGTGCGCGTGGCGGAGGGTGAGTTCGTGGTGGCATGCACTGGTCTGAGGTTGATCTGTTTCAACGCGTGGAACCCGGAGGTTCTGGTGCGGGACGAGATCTCGGCGACGGGGTTCGTGGTGAGTTCGATGGACGTGAGTCCGGAGGCGTTTGTGGTGGTGGAGCGTGCGGGGGTGGGAACGGTGTGGCGCGTGGGGACGATGGAGTTGATGAGCCGGTTTATGTTGAGGGGTTCGTGGGTTCGAGGGTTGTGGGGTTGCATGAACCTTGGGTACGTGGTAACCTTTTCTCCTCATCCTTCACCATTCTTGAGGGTTTGGAACATTGAGCAAGAGGATGGACGGTTGTGTGTGAGAGTGTTTCTGCGTGCAGGAGAGGTGAATAGCATGGTGGGTGATGACAGACACGTGGCTATCTCTTCCAACAACATTAACCTATTGGATTTTGGTGTACAGGATGATCCTTAG 1407 0.5892 MSSTSSSSSSSSSSSSSTSAPYDAVAAPDIPGPSTRRTAQFEGPSSSRQRAMNEVLPEPFLEALANQLAIDAANYNGRLAAAPALANLFQVCSTWREVSRSDLLWEHLTRRIWRRTFRVRDTWHSDYINWHRTATNFETGRLSFLTPRFDPSEHRRGLICRCLSLSDTRLACGFIDGTVRVFDLETYDHVSTYLSDHGPLFGPYSRSVSGIVISDSDITFARLDGDIYVDAINVHGQSQARRAVSGFVMNNGVLVGFAGTRRRWVGLFAGIAGGAFQVWNAESGERVFVGGSLTDPETVMGWHMLTELVDPVGRVRVAEGEFVVACTGLRLICFNAWNPEVLVRDEISATGFVVSSMDVSPEAFVVVERAGVGTVWRVGTMELMSRFMLRGSWVRGLWGCMNLGYVVTFSPHPSPFLRVWNIEQEDGRLCVRVFLRAGEVNSMVGDDRHVAISSNNINLLDFGVQDDP 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03038 468 Gene3D - 46 137 - -
Viun8g03038 468 PANTHER WD40 REPEAT PROTEIN 12, 37 7 425 - -
Viun8g03038 468 MobiDBLite consensus disorder prediction 1 22 - -
Viun8g03038 468 MobiDBLite consensus disorder prediction 1 50 - -
Viun8g03038 468 SUPERFAMILY F-box domain 84 132 IPR036047 GO:0005515
Viun8g03038 468 SUPERFAMILY WD40 repeat-like 154 456 IPR036322 GO:0005515
Viun8g03038 468 Gene3D - 138 463 IPR015943 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Viun8g03038 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03038 - - gmx:100807240 645.195