Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03019 ATGCCATTGATCCTAAATCTCGCACCACTCACCGGAGCCGTCACGACTCTCCGACCTCCGCCCGGTGCCACGATGGTCCGGGCATTCACTGCTACGATCGACTCCCGGAGGCCGGCGAGCCTCTACGAAGTTCTCCGGATCAAGCAGAACGCGTCCGCGGTGGAGATAAAATCGGCGTACCGGAACCTGGCGAAGGTGTACCACCCTGATTCGGCGCTCCGGCGATCGGAATCGGACGAACGGGACTTCATCATGATTCATGACGCGTACCAGACGCTCTCGGATCCGTCAGCGAGAGCCGTTTATGATCTGTCGTTGATGGCGGCGCGTGGCGGTAGTGGCTCCTTCTCTTCTCTGGTGGCCCCCGATGGGTCTTCCCGGTTGTACTACCAGACCCGCAAGTGGGAAACGGATCAATGCTGGTAG 426 0.6009 MPLILNLAPLTGAVTTLRPPPGATMVRAFTATIDSRRPASLYEVLRIKQNASAVEIKSAYRNLAKVYHPDSALRRSESDERDFIMIHDAYQTLSDPSARAVYDLSLMAARGGSGSFSSLVAPDGSSRLYYQTRKWETDQCW 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03019 141 Pfam DnaJ domain 41 103 IPR001623 -
Viun8g03019 141 SUPERFAMILY Chaperone J-domain 40 117 IPR036869 -
Viun8g03019 141 SMART dnaj_3 39 98 IPR001623 -
Viun8g03019 141 Gene3D DnaJ domain 29 116 IPR036869 -
Viun8g03019 141 ProSiteProfiles dnaJ domain profile. 40 106 IPR001623 -
Viun8g03019 141 CDD DnaJ 42 95 IPR001623 -
Viun8g03019 141 ProSitePatterns Nt-dnaJ domain signature. 83 102 IPR018253 -
Viun8g03019 141 PRINTS DnaJ domain signature 60 75 IPR001623 -
Viun8g03019 141 PRINTS DnaJ domain signature 78 98 IPR001623 -
Viun8g03019 141 PRINTS DnaJ domain signature 42 60 IPR001623 -
Viun8g03019 141 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 28 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03019 Viun-Chr8 37440221 37441353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03019 42 103 C2H2 Transcription Factor Family AT1G74250 42.424 4.12e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03019 - - gmx:100786034 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g03019 8 37440221 37441353 Viun8g03019 8 37440221 37441353 ECH
Viun6g01020 6 19741803 19742531 Viun8g03019 8 37440221 37441353 PCT