Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03016 ATGCTACCTTCTGTTGATGAACTTGGCTCACCAAAACAACCAAGGATTCAACACTCTCTGCGATCAGAATCATCAAATTCCCTTGCCAGCACAAGACCAATTCTTGGGCAACCTCGACTTCAAAGGACCAAACCAATCATATGGTGTGCTGCAATACTGTGCTTAATATTCAGCCTCCTACTCATCTTCTTTGGAATTGCAACACTGATCCTCTACCTTGCAATGAAGCCAAAAAATCCCACTTTTGACATTCCCAATGCAAGCCTCAATGTAGTCTACTTCGACTCACCACAGTACCTCAATGGTGAGTTCACTCTCGTTGCAAATTTCTCCAATCCTAACAGAAGAATTGGGGTGAGGTTTGAGTCCTTGAATATTGAGCTTTTCTACTCGGAAAGACTGGTATCATCACAGAAAGTAAAGCCTTTTACTCAGAAGCCAAGGGAAACCAGGTTGCAATCAGTGAACCTGATATCAAGCTTAGTGTTCTTGCCTCAAGATGTTGGTGTGAAACTTCAGAGGCAAGTGGAAAATAACAGGATCAATTACAATGCAAGAGGAACTTTTAAAGTGAGGTTCAATATTGGCCTTATCCATTTATCTTACTGGCTGAATACCATATGCCAGATAGAGATGACTAGTCCTCCAACTGGTATTCTAGTGGCAAGACAATGCATAACAAGCAGATCAAGATGA 696 0.4167 MLPSVDELGSPKQPRIQHSLRSESSNSLASTRPILGQPRLQRTKPIIWCAAILCLIFSLLLIFFGIATLILYLAMKPKNPTFDIPNASLNVVYFDSPQYLNGEFTLVANFSNPNRRIGVRFESLNIELFYSERLVSSQKVKPFTQKPRETRLQSVNLISSLVFLPQDVGVKLQRQVENNRINYNARGTFKVRFNIGLIHLSYWLNTICQIEMTSPPTGILVARQCITSRSR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03016 231 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 21 220 - -
Viun8g03016 231 MobiDBLite consensus disorder prediction 1 30 - -
Viun8g03016 231 MobiDBLite consensus disorder prediction 15 30 - -
Viun8g03016 231 Pfam Late embryogenesis abundant protein 111 204 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03016 Viun-Chr8 37429855 37431273 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03016 - - pvu:PHAVU_008G282100g 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g03016 8 37429855 37431273 Viun8g03016 8 37429855 37431273 ECH
Viun6g01009 6 19544892 19545653 Viun8g03016 8 37429855 37431273 PCT