Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03014 ATGGGAACTAAGTCAGCTGTGGATTTAATGGAGTCTTCATCTGAGGTTCACTTTTCTGGAGTGTACATGGATGGTATAGATCAAAGAAACGCTGGCACAGAGCAACCGACTACTTCTGCAACCGACATGAATAAACAACCATTCGTGATAGGTGTTGCTGGTGGAGCAGCCTCTGGTAAGACATCAGTTTGTGATATGATTATTCAGCAGCTTCATGACCAACGAGTTGTACTTGTTAATCAGGATTCATTTTACCATAATTTGTCCGAGGCGGAACTTATAAGAGTACAAGATTACAACTTTGACCATCCTGAAGCTTTTGATACTGAGCATTTGCTACGTGTTATGGACAAGTTGAAGCGTGGCCAAGCAGTAGATATTCCGAAGTATGATTTTAAGGGTTACAAAAGTGGTGTTTTTCCAGCGAGACGGGTAAACCTGGCGGATGTTATTATTTTGGAAGGTATCCTTGTTTTCCATGATCCACGAGTACGGGCATTGATGAATATGAAGATATTTGTCGACACAGATGCTGATATTCGCTTGGCGAGAAGAATTAAACGGGATACTGCTGACAATGCTCGTGATATTGGAGCTGTGCTCGATCAGTATTCTAAATTTGTGAAGCCGGCTTTTGATGACTTTATTCTTCCCACCAAGAAGTATGCCGATATCATTATACCCCGTGGAGGAGATAATCATGTAGCTATCGATTTGATTGTACAGCATATCCGCATGAAGCTTGGGCAGCATGACTTGTGTAAAATATACCCTAGCTTATATGTCATTCAGTCTACTTTTCAGATACGGGGTATGCATACCCTGATTCGGGATTCTCAAACAACGAAACATGACTTTGTATTTTATTCTGACCGTTTGATTCGTTTGGTTGTAGAACATGGCCTAGGGCATCTTCCATTTACGGAAAAGCAAGTAATCACTCCAACTGGATCGGTTTACAGTGGTGTGGATTTCTGTAAGAGGTTGTGTGGTGTCTCCATCATCCGGAGTGGCGAGAGTATGGAAAATGCTTTACGAGCATGCTGCAAAGGCATCAAAATTGGGAAAATTCTTATTCACAGAGAAGGTGACAATGGTCAACAGTTAATATATGAGAAGTTGCCAAAGGATATCTCAGATAGACATGTATTGCTTTTGGATCCTATCTTAGGCACAGGTAATTCGGCTGTTCAAGCAATTTCTCTACTTTTAAAGAAGGGTGTACCAGAGTTCAACATTATATTTCTCAATCTGATATCAGCACCTCAAGGTGTTCATGTGGTCTGCAAAAGCTTCCCAAAAATAAAGATCGTGACATCTGATATTGAAATTGGTTTGAATGAAGATTTCCGTGTCATACCTGGCATGGGTGAGTTTGGGGATCGGTATTTTGGAACAGATGATGACCAGCAGGTGCTGCTCCCTTCACACTAG 1434 0.4142 MGTKSAVDLMESSSEVHFSGVYMDGIDQRNAGTEQPTTSATDMNKQPFVIGVAGGAASGKTSVCDMIIQQLHDQRVVLVNQDSFYHNLSEAELIRVQDYNFDHPEAFDTEHLLRVMDKLKRGQAVDIPKYDFKGYKSGVFPARRVNLADVIILEGILVFHDPRVRALMNMKIFVDTDADIRLARRIKRDTADNARDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRMKLGQHDLCKIYPSLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPKDISDRHVLLLDPILGTGNSAVQAISLLLKKGVPEFNIIFLNLISAPQGVHVVCKSFPKIKIVTSDIEIGLNEDFRVIPGMGEFGDRYFGTDDDQQVLLPSH 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03014 477 PANTHER URIDINE KINASE 44 377 - -
Viun8g03014 477 Pfam Uracil phosphoribosyltransferase 265 466 - -
Viun8g03014 477 PRINTS Uridine kinase signature 77 88 - -
Viun8g03014 477 PRINTS Uridine kinase signature 193 204 - -
Viun8g03014 477 PRINTS Uridine kinase signature 122 137 - -
Viun8g03014 477 PRINTS Uridine kinase signature 179 189 - -
Viun8g03014 477 PRINTS Uridine kinase signature 47 64 - -
Viun8g03014 477 PRINTS Uridine kinase signature 215 228 - -
Viun8g03014 477 FunFam Uridine kinase 251 466 - -
Viun8g03014 477 NCBIfam uridine kinase 45 247 IPR000764 -
Viun8g03014 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 240 IPR027417 -
Viun8g03014 477 Gene3D - 251 466 IPR029057 -
Viun8g03014 477 CDD UMPK 49 245 IPR000764 -
Viun8g03014 477 Pfam Phosphoribulokinase / Uridine kinase family 49 235 IPR006083 GO:0005524|GO:0016301
Viun8g03014 477 CDD PRTases_typeI 324 442 IPR000836 -
Viun8g03014 477 SUPERFAMILY PRTase-like 250 467 IPR029057 -
Viun8g03014 477 Gene3D - 43 250 IPR027417 -
Viun8g03014 477 FunFam Uridine kinase 44 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03014 Viun-Chr8 37417760 37425607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03014 1 469 PRT Gene Family AT4G26510 83.439 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03014 K00876 - gmx:100798205 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g03014 8 37417760 37425607 Viun8g03014 8 37417760 37425607 ECH
Viun6g01008 6 19535101 19541877 Viun8g03014 8 37417760 37425607 PCT