Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03013 ATGAAGAGAAACATGCCACAGGAAAGTATACTAAGCTCGATTTTCGCATCTCCTCATAAGAGAGGATTGAATTTGAAATGTTCTGCTTCAGTTTGTACCAACAATGAGGCTTCGTACCCTGTGATGGCGGAGGAGAGCATCAACGATCATGAATTGGCTCAGAGGAAAGCAGAGGAAGCAGCTTCAAGGAGATACGAAGCAGCAGAATGGCTTCGCCAAATGGACAACAGCGCATCTTCATCGCTCTCCAAAGAACCCTCCGAAGAGGAATTCTGCCTCGCACTCCGCAACGGTCTCATTCTCTGCAACGTCCTCAACAGAGTCAACCCCGGCGCTGTCGTCAAGGTTGTCGACAATGCAGTGGTCGACAGCCTCGCCCTCCAGTCTTCCGAGGGGCCCGCCCAGTCTGCAATTCAGTATTTCGAGAACATGCGAAACTTTCTGGAGGCCGTCAACGACATGAAGCTTTTGACATTCGAAGCTTCTGATTTGGAAAAGGGGGGTTCATCGAGCAAAGTTGTGGACTGCATTCTCTGTTTGAAAGGGTATTATGAATGGAAGCTGTCGGGTGGAGTCGGTGTATGGAGATATGGTGGAACTGTCAGGATTACTTCTTTCCCCAAATGGTCTCCTACCAACATACTCGGCACTGAAAGTGTTGACGAGTCCGAGTCATCACAGTTTCTTCATCTGTCTGGAGGGGTATCCATTGAAGAAACCAAAGCTGCTAATGCTTTGACTTCCCTTTTTGACAAGTTTGGACTCAAGCTTCTATTGGCTTACCTCAAAGAGACCGATGGGGTTGATGATCTACCGTTGAATGCAATGGTAATAGATTCTTTGATCAGAAAGGTTATCAGGGATTTTTCTGCATTGCTTGATTCTCAAGGCACTCAGCTTGGACATTTCCTCAAGAAAATATTGAAAGGCGATACCAGTTGTCTCACTAAGAGAGAATTCGTGGACGCTATCACATTATATCTTAATCAAAGACGTAGTTTGGCATCAAATGAAGTCTCTAAATTATGCACTTGCGGTGGAAAACGCGACAATAATCAGCACAGTGTTCAATATTGTGCCAAGCATGCTGAAATAATTGATGCCCAGCAAAAAGAGCTTGAGGGACTGAGGTACTTTTATGAAGGAATAAAATTGGAGCTGAAACAAATTCAATCAAAGTGGGACCAAGAATTGAACAGGCTTGAGAATCATATAAAGAGCCTTGAAGAGGCCTCCTCTTCGTATCACAAAGTTTTGGAGGAGAATCGTGTTCTTTACAATCAAGTACAGGACCTCAAAGGAGCCATTAGGGTGTACTGTAGAGTGAGGCCCTTCTTGCCAGGACAACCAAATGGACAATCTACTGTAGATTATATAGGAGAAAATGGAAACATAATGATTATGAATCCCCTTAAGCAAGGAAAAGATGCTAGAAGAGTGTTTTCATTCAATAAGGTGTTTGCAACAAGTGCCACCCAAGAAGAAATATATGCTGACACTCAACCATTGGTTAGGTCCGCCTTAGATGGATATAATGTATGCATCTTTGCATATGGACAGACTGGGTCAGGAAAAACCTACACAATGAGTGGCCCTGATCTGATGACTGAGGAGACATGGGGTGTAAACTACAGGGCTTTGCGTGACTTATTTCATATTTCAAAGGAAAGAGCAGATGCCATAAAATATGAAGTTGGCGTCCAGATGATTGAAATATACAATGAGCAAGTGAGAGATTTATTAGTCAGCGATGGCTCTAACAGAAGATTGGATATACGAAACAACTCTCAGTTGAATGGGCTTAATGTGCCCGATGCATCTTTAGTTCCGGTTAATTGCACACAAGATGTTCTTGATTTAATGAAAGTTGGTCAGAGGAATCGTGCTGTTGGTGCTACAGCTTTAAATGAGCGAAGCAGCCGTTCTCATAGTGTGTTGACAGTTCATGTCAGAGGGAGGGACTTAGTGTCTAACTCCATTCTTAAGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAAAGAGTGGACAAATCGGAGGCTGTTGGCGAGAGACTAAAGGAGGCTCAGCATATAAATAAATCTCTTTCTGCACTTGGGGATGTTATATCTGCTTTGGCACAGAAGAGTCAACATATTCCTTATAGAAATAGCAAGCTCACACAAGTTCTACAAGATTCATTAGGTGGTCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAGCTTAATGCTCTTGGAGAGACAATTAGCACACTTAAGTTTGCGGAGAGAGTTGCAACCATTGAACTTGGGGCTGCTCAATCTAATAAAGAAACTGGAGAAATTCGGGAGCTAAAGGAAGAGATATCAAATATCAAATCAGCATTGGAGAGGAAGGAAACTGAACTACAGCAATGGAAAGCTGGGAATGCACGGAATCCCACAGAATCTCAGAAAGCACCAAGAGCTGTTTCACCTTTCCGTTTACCCAAAAATGGTACCAGTGACAGCATGAAACCTGAAAACTATCAAAGACACATGGACGATAGAAGCTCTGAGGCTAAAACTTGTTCTTCGGGCAAGCAAAGAAGGTCACGATTTCCCTCTACGCATATAGAAAAGGAGTCGATACCAAAAATGTCTATTCTGGCTGAAGAAAAAATAGTGAGCTCAGGGAATACTAGATCACCATCACCTCCAGTCCGGAGGAGATCAATATCCACTGATAGAGGGTCAGTCATTAAAAGCAAGGTCCGAAGTGACACAGCAGAAAACCAACCAATATCAAAGCATCTACTTCCAGCTAGAGTACTAGTAAATAAATCTCTAGTCACAATGCCGATGCCCTCATCTATAGACAATAACTCAAGGGTGAATCTGCATTCACAGGAGTCAGTGAAGCAAGATCGCATTAATGAAACTCTCTTCAACCTCCAGAAGATAAACTCCCGTAAAGTTAACCAAGAACATGAAGAGGAACAACTCAAGCAAGCTGCTCTTGGTGTGGCAAGACATGGTGGAACTAGGAAGAACAAGGTTGACAATAAGTCCAAGGTTAAGCCTCATCAACAGTTTCCCTTTAGGATTCAAAAACCTGATATGACGATACCTATTACTGACATGGAAATTGGCCGTGATATGACCACGGAGGCACCTCGAAAGAGCAATTATTGTGAGCCAGAAAATGATATAAGCCTAATGGAGTCTGCAGTTCACGGTGTTAATCTTAAGAAGATAAATCACAACATCTCTAGGAATTTTCAGAACATTGGATCAAGAGGAGGCCAAGCAGCTGAACCATTATTGTCCAGCAAAGTTGAAAATAAAATATTTCAACATGGTTCAGGACGCAATCTTAAGGAAGGCACCAACACTACATTGCCTGAATTTAGAAGGAGCCGATCTACGCCACGTGGAAAGTTTTTTGTTTTATCTTGA 3423 0.4268 MKRNMPQESILSSIFASPHKRGLNLKCSASVCTNNEASYPVMAEESINDHELAQRKAEEAASRRYEAAEWLRQMDNSASSSLSKEPSEEEFCLALRNGLILCNVLNRVNPGAVVKVVDNAVVDSLALQSSEGPAQSAIQYFENMRNFLEAVNDMKLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKWSPTNILGTESVDESESSQFLHLSGGVSIEETKAANALTSLFDKFGLKLLLAYLKETDGVDDLPLNAMVIDSLIRKVIRDFSALLDSQGTQLGHFLKKILKGDTSCLTKREFVDAITLYLNQRRSLASNEVSKLCTCGGKRDNNQHSVQYCAKHAEIIDAQQKELEGLRYFYEGIKLELKQIQSKWDQELNRLENHIKSLEEASSSYHKVLEENRVLYNQVQDLKGAIRVYCRVRPFLPGQPNGQSTVDYIGENGNIMIMNPLKQGKDARRVFSFNKVFATSATQEEIYADTQPLVRSALDGYNVCIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERADAIKYEVGVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQLNGLNVPDASLVPVNCTQDVLDLMKVGQRNRAVGATALNERSSRSHSVLTVHVRGRDLVSNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSQHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNALGETISTLKFAERVATIELGAAQSNKETGEIRELKEEISNIKSALERKETELQQWKAGNARNPTESQKAPRAVSPFRLPKNGTSDSMKPENYQRHMDDRSSEAKTCSSGKQRRSRFPSTHIEKESIPKMSILAEEKIVSSGNTRSPSPPVRRRSISTDRGSVIKSKVRSDTAENQPISKHLLPARVLVNKSLVTMPMPSSIDNNSRVNLHSQESVKQDRINETLFNLQKINSRKVNQEHEEEQLKQAALGVARHGGTRKNKVDNKSKVKPHQQFPFRIQKPDMTIPITDMEIGRDMTTEAPRKSNYCEPENDISLMESAVHGVNLKKINHNISRNFQNIGSRGGQAAEPLLSSKVENKIFQHGSGRNLKEGTNTTLPEFRRSRSTPRGKFFVLS 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03013 1140 MobiDBLite consensus disorder prediction 803 872 - -
Viun8g03013 1140 SMART kinesin_4 433 771 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03013 1140 SMART ch_5 63 183 IPR001715 GO:0005515
Viun8g03013 1140 CDD KISc_C_terminal 433 765 - -
Viun8g03013 1140 Coils Coil 391 411 - -
Viun8g03013 1140 SUPERFAMILY Calponin-homology domain, CH-domain 55 214 IPR036872 -
Viun8g03013 1140 Gene3D - 53 185 IPR036872 -
Viun8g03013 1140 CDD CH_AtKIN14-like 63 181 - -
Viun8g03013 1140 FunFam kinesin-like protein KIN-14F 53 185 - -
Viun8g03013 1140 PRINTS Kinesin heavy chain signature 713 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03013 1140 PRINTS Kinesin heavy chain signature 633 650 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03013 1140 PRINTS Kinesin heavy chain signature 664 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03013 1140 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03013 1140 Pfam Kinesin motor domain 441 763 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03013 1140 Gene3D Kinesin motor domain 378 765 IPR036961 -
Viun8g03013 1140 Coils Coil 770 804 - -
Viun8g03013 1140 FunFam kinesin-like protein KIN-14F 430 804 - -
Viun8g03013 1140 ProSiteProfiles Calponin homology (CH) domain profile. 61 185 IPR001715 GO:0005515
Viun8g03013 1140 ProSiteProfiles Kinesin motor domain profile. 435 763 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03013 1140 MobiDBLite consensus disorder prediction 884 900 - -
Viun8g03013 1140 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 800 IPR027417 -
Viun8g03013 1140 MobiDBLite consensus disorder prediction 884 918 - -
Viun8g03013 1140 MobiDBLite consensus disorder prediction 836 872 - -
Viun8g03013 1140 PANTHER KINESIN-LIKE PROTEIN KLP-3 68 944 IPR027640 GO:0003777|GO:0007018
Viun8g03013 1140 Pfam Calponin homology (CH) domain 62 185 IPR001715 GO:0005515
Viun8g03013 1140 Coils Coil 973 993 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03013 Viun-Chr8 37398848 37409159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03013 426 763 Calmodulin-binding Proteins AT5G65930 44.248 3.06e-78 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03013 K10406 - gmx:100811516 1921.36