Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03011 ATGCCACAGGAAAGTATACTAAGCTCGATTTTCGCATCTCCTCATAAGAGAGGATTGAATTTGAAATGTTCTGCTTCAGTTTGTACCAACAATGAGGCTTCGTACCCTGTGATGGCGGAGGAGAGCATCAACGATCATGAATTGGCTCAGAGGAAAGCAGAGGAAGCAGCTTCAAGGAGATACGAAGCAGCAGAATGGCTTCGCCAAATGGACAACAGCGCATCTTCATCGCTCTCCAAAGAACCCTCCGAAGAGGAATTCTGCCTCGCACTCCGCAACGGTCTCATTCTCTGCAACGTCCTCAACAGAGTCAACCCCGGCGCTGTCGTCAAGGTTGTCGACAATGCAGTGGTCGACAGCCTCGCCCTCCAGTCTTCCGAGGGGCCCGCCCAGTCTGCAATTCAGTATTTCGAGAACATGCGAAACTTTCTGGAGGCCGTCAACGACATGAAGCTTTTGACATTCGAAGCTTCTGATTTGGAAAAGGGGGGTTCATCGAGCAAAGTTGTGGACTGCATTCTCTGTTTGAAAGGGTATTATGAATGGAAGCTGTCGGGTGGAGTCGGTGTATGGAGATATGGTGGAACTGTCAGGATTACTTCTTTCCCCAAATGGTCTCCTACCAACATACTCGGCACTGAAAGTGTTGACGAGTCCGAGTCATCACAGTTTCTTCATCTGTCTGGAGGGGTATCCATTGAAGAAACCAAAGCTGCTAATGCTTTGACTTCCCTTTTTGACAAGTTTGGACTCAAGCTTCTATTGGCTTACCTCAAAGAGACCGATGGGGTTGATGATCTACCGTTGAATGCAATGGTAATAGATTCTTTGATCAGAAAGGTTATCAGGGATTTTTCTGCATTGCTTGATTCTCAAGGCACTCAGCTTGGACATTTCCTCAAGAAAATATTGAAAGGCGATACCAGTTGTCTCACTAAGAGAGAATTCGTGGACGCTATCACATTATATCTTAATCAAAGACGTAGTTTGGCATCAAATGAAGTCTCTAAATTATGCACTTGCGGTGGAAAACGCGACAATAATCAGCACAGTGTTCAATATTGTGCCAAGCATGCTGAAATAATTGATGCCCAGCAAAAAGAGCTTGAGGGACTGAGGTACTTTTATGAAGGAATAAAATTGGAGCTGAAACAAATTCAATCAAAGTGGGACCAAGAATTGAACAGGCTTGAGAATCATATAAAGAGCCTTGAAGAGGCCTCCTCTTCGTATCACAAAGTTTTGGAGGAGAATCGTGTTCTTTACAATCAAGTACAGGACCTCAAAGGAGCCATTAGGGTGTACTGTAGAGTGAGGCCCTTCTTGCCAGGACAACCAAATGGACAATCTACTGTAGATTATATAGGAGAAAATGGAAACATAATGATTATGAATCCCCTTAAGCAAGGAAAAGATGCTAGAAGAGTGTTTTCATTCAATAAGGTGTTTGCAACAAGTGCCACCCAAGAAGAAATATATGCTGACACTCAACCATTGGTTAGGTCCGCCTTAGATGGATATAATGTATGCATCTTTGCATATGGACAGACTGGGTCAGGAAAAACCTACACAATGAGTGGCCCTGATCTGATGACTGAGGAGACATGGGGTGTAAACTACAGGGCTTTGCGTGACTTATTTCATATTTCAAAGGAAAGAGCAGATGCCATAAAATATGAAGTTGGCGTCCAGATGATTGAAATATACAATGAGCAAGTGAGAGATTTATTAGTCAGCGATGGCTCTAACAGAAGATTGGATATACGAAACAACTCTCAGTTGAATGGGCTTAATGTGCCCGATGCATCTTTAGTTCCGGTTAATTGCACACAAGATGTTCTTGATTTAATGAAAGTTGGTCAGAGGAATCGTGCTGTTGGTGCTACAGCTTTAAATGAGCGAAGCAGCCGTTCTCATAGTGTGTTGACAGTTCATGTCAGAGGGAGGGACTTAGTGTCTAACTCCATTCTTAAGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAAAGAGTGGACAAATCGGAGGCTGTTGGCGAGAGACTAAAGGAGGCTCAGCATATAAATAAATCTCTTTCTGCACTTGGGGATGTTATATCTGCTTTGGCACAGAAGAGTCAACATATTCCTTATAGAAATAGCAAGCTCACACAAGTTCTACAAGATTCATTAGGTGGTCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAGCTTAATGCTCTTGGAGAGACAATTAGCACACTTAAGTTTGCGGAGAGAGTTGCAACCATTGAACTTGGGGCTGCTCAATCTAATAAAGAAACTGGAGAAATTCGGGAGCTAAAGGAAGAGATATCAAATATCAAATCAGCATTGGAGAGGAAGGAAACTGAACTACAGCAATGGAAAGCTGGGAATGCACGGAATCCCACAGAATCTCAGAAAGCACCAAGAGCTGTTTCACCTTTCCGTTTACCCAAAAATGGTACCAGTGACAGCATGAAACCTGAAAACTATCAAAGACACATGGACGATAGAAGCTCTGAGGCTAAAACTTGTTCTTCGGGCAAGCAAAGAAGGTCACGATTTCCCTCTACGCATATAGAAAAGGAGTCGATACCAAAAATGTCTATTCTGGCTGAAGAAAAAATAGTGAGCTCAGGGAATACTAGATCACCATCACCTCCAGTCCGGAGGAGATCAATATCCACTGATAGAGGGTCAGTCATTAAAAGCAAGGTCCGAAGTGACACAGCAGAAAACCAACCAATATCAAAGCATCTACTTCCAGCTAGAGTACTAGTAAATAAATCTCTAGTCACAATGCCGATGCCCTCATCTATAGACAATAACTCAAGGGTGAATCTGCATTCACAGGAGTCAGTGAAGCAAGATCGCATTAATGAAACTCTCTTCAACCTCCAGAAGATAAACTCCCGTAAAGTTAACCAAGAACATGAAGAGGAACAACTCAAGCAAGCTGCTCTTGGTGTGGCAAGACATGGTGGAACTAGGAAGAACAAGGTTGACAATAAGTCCAAGGTTAAGCCTCATCAACAGTTTCCCTTTAGGATTCAAAAACCTGATATGACGATACCTATTACTGACATGGAAATTGGCCGTGATATGACCACGGAGGCACCTCGAAAGAGCAATTATTGTGAGCCAGAAAATGATATAAGCCTAATGGAGTCTGCAGTTCACGGTGTTAATCTTAAGAAGATAAATCACAACATCTCTAGGAATTTTCAGAACATTGGATCAAGAGGAGGCCAAGCAGCTGAACCATTATTGTCCAGCAAAGTTGAAAATAAAATATTTCAACATGGTTCAGGACGCAATCTTAAGGAAGGCACCAACACTACATTGCCTGAATTTAGAAGGAGCCGATCTACGCCACGTGGAAAGTTTTTTGTTTTATCTTGA 3411 0.4271 MPQESILSSIFASPHKRGLNLKCSASVCTNNEASYPVMAEESINDHELAQRKAEEAASRRYEAAEWLRQMDNSASSSLSKEPSEEEFCLALRNGLILCNVLNRVNPGAVVKVVDNAVVDSLALQSSEGPAQSAIQYFENMRNFLEAVNDMKLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKWSPTNILGTESVDESESSQFLHLSGGVSIEETKAANALTSLFDKFGLKLLLAYLKETDGVDDLPLNAMVIDSLIRKVIRDFSALLDSQGTQLGHFLKKILKGDTSCLTKREFVDAITLYLNQRRSLASNEVSKLCTCGGKRDNNQHSVQYCAKHAEIIDAQQKELEGLRYFYEGIKLELKQIQSKWDQELNRLENHIKSLEEASSSYHKVLEENRVLYNQVQDLKGAIRVYCRVRPFLPGQPNGQSTVDYIGENGNIMIMNPLKQGKDARRVFSFNKVFATSATQEEIYADTQPLVRSALDGYNVCIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERADAIKYEVGVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQLNGLNVPDASLVPVNCTQDVLDLMKVGQRNRAVGATALNERSSRSHSVLTVHVRGRDLVSNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSQHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNALGETISTLKFAERVATIELGAAQSNKETGEIRELKEEISNIKSALERKETELQQWKAGNARNPTESQKAPRAVSPFRLPKNGTSDSMKPENYQRHMDDRSSEAKTCSSGKQRRSRFPSTHIEKESIPKMSILAEEKIVSSGNTRSPSPPVRRRSISTDRGSVIKSKVRSDTAENQPISKHLLPARVLVNKSLVTMPMPSSIDNNSRVNLHSQESVKQDRINETLFNLQKINSRKVNQEHEEEQLKQAALGVARHGGTRKNKVDNKSKVKPHQQFPFRIQKPDMTIPITDMEIGRDMTTEAPRKSNYCEPENDISLMESAVHGVNLKKINHNISRNFQNIGSRGGQAAEPLLSSKVENKIFQHGSGRNLKEGTNTTLPEFRRSRSTPRGKFFVLS 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03011 1136 Pfam Kinesin motor domain 437 759 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03011 1136 MobiDBLite consensus disorder prediction 799 868 - -
Viun8g03011 1136 CDD KISc_C_terminal 429 761 - -
Viun8g03011 1136 Coils Coil 387 407 - -
Viun8g03011 1136 Gene3D - 49 181 IPR036872 -
Viun8g03011 1136 FunFam kinesin-like protein KIN-14F 49 181 - -
Viun8g03011 1136 CDD CH_AtKIN14-like 59 177 - -
Viun8g03011 1136 ProSiteProfiles Calponin homology (CH) domain profile. 57 181 IPR001715 GO:0005515
Viun8g03011 1136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 432 796 IPR027417 -
Viun8g03011 1136 SMART ch_5 59 179 IPR001715 GO:0005515
Viun8g03011 1136 Coils Coil 766 800 - -
Viun8g03011 1136 SUPERFAMILY Calponin-homology domain, CH-domain 51 210 IPR036872 -
Viun8g03011 1136 PRINTS Kinesin heavy chain signature 506 527 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03011 1136 PRINTS Kinesin heavy chain signature 629 646 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03011 1136 PRINTS Kinesin heavy chain signature 709 730 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03011 1136 PRINTS Kinesin heavy chain signature 660 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03011 1136 MobiDBLite consensus disorder prediction 880 896 - -
Viun8g03011 1136 Pfam Calponin homology (CH) domain 58 181 IPR001715 GO:0005515
Viun8g03011 1136 MobiDBLite consensus disorder prediction 832 868 - -
Viun8g03011 1136 MobiDBLite consensus disorder prediction 880 914 - -
Viun8g03011 1136 Gene3D Kinesin motor domain 374 761 IPR036961 -
Viun8g03011 1136 PANTHER KINESIN-LIKE PROTEIN KLP-3 64 940 IPR027640 GO:0003777|GO:0007018
Viun8g03011 1136 FunFam kinesin-like protein KIN-14F 426 800 - -
Viun8g03011 1136 ProSiteProfiles Kinesin motor domain profile. 431 759 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun8g03011 1136 Coils Coil 969 989 - -
Viun8g03011 1136 SMART kinesin_4 429 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03011 Viun-Chr8 37398848 37409159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03011 422 759 Calmodulin-binding Proteins AT5G65930 44.248 2.94e-78 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03011 K10406 - gmx:100811516 1921.36