Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03003 ATGGAGAATGAAAGAGAAGATGAGATTGAGGACATGTCAACGTCACCCCCATCTCTTGGATCCATGCAATTTGCAGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATACCTTCCCAATATCTACACTGAGATTGACATAAAAATTGAGGATTCCAATTTCAACCAAGATCCTCCCCTCCCCATTTATCTCAAGTTTGAAGATGTAGAGTATAAGGTGAGAGGTAGCCACGCGGCTTCCACTAATCCTGTGAAGTCAGTGATGTCAAAAGTTGCCATACAACACAACCTGGGAGAAGACAAATACAAGAAAATTTTGAAGGGTATGACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTCTGATGGGTCCTTCTGGGAGTGGAAAGACAACCTTGTTGAGAGTTGTAGGGGGAAGATTAGTTGACAACGTAAAGGGAAAGATTACTTACAATGACGTTCGGTTTAATGCAGCTGTCAAGAGGAGGTTAGATTATTTTCTGTGCTATAGGATTGGCTTTGTTACACAAGAGGATGTGCTTTTCCCACAACTTACGGTAGAGGAAACATTAATCTTCTCTGCATTCTTAAGGTTACCAGGGAATATGAGCGAGCAACAAAAGTATGCAAGAGTGGAGACCACTATCAAGGAGCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGGTGGAGGATATCTCAAAAGCATCTCTGGAGGAGAAAGGAAGCGAACCAGCATAGGCTATGAAATCCTTGTTGATCCTTCACTGCTTCTACTTGATGAACCAACTTCAGGCCTTGATTCCACAGCAGCTAACAGACTCCTTCTCACTCTTCAGGGACTTGCCAAGGGTGGAAGGACCATAATCACAACAATTCACCAGCCATCGAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTTATATCAGAAGGGTACCCCGTTTACTATGGGAAGGCCAAGGACTCAATGCCGTACTTTTCATCGTTGAGTTTCACCCCGGAAATACCAATGAATCCTGCAGAATTCATGCTTGACTTGGCAACTGGACAAGTGAATAACATAAGCTTTCCACAAGATATTTTCAAAGATCAAGAATCTACCGACCGTTCAAAATCTGTCATTAAATATCTACAACTGAAGTATAAGGAAACACTGGAACCAAAAGAAAAAGATGAGAATCATGGAGCAACAAACACACCAGAACATCTTCAACTAGCCATTCAGGTTAAAAAGGACTGGACAGTGAGCTGGTTGGACCAATTCTTTATTCTTTACAAGAGAACATTCAGAGCAAGATGCAAGGACTATTTTGATAAATTAAGGTTAGTTCAAGCACTTGGCATTGCTCTTTTGTTGGGGCTACTTTGGTGGAAATCTTCAACCAATACAGAGGCTCAAGTTAGAGATCAGGTTGGACTAATGTTCTATATCTGTATATTCTGGACATCTTCATGCATTTTTGGAGCAGTCTATGTATTTCCATTTGAAAAGGTCTATTTGGTGAAAGAAAGGAAAGCAGATATGTATAGACTGAGTGTGTACTATGTAAGCAGCACTCTATGTGATATGGTGGCGCATGTTTTCTACCCTACTTTCTTCATGCTTATCTTGTACTTCATGGCTGGATTTAAGAGGACTGTCGCTTGCTTCTTCCTGACTTTGTTCGCAGTGCTGCTAATAGCTATAACAAGTCAAGGAGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGGATAGTTGCTTCTTTGATACTAATGTTGTTCCTTCTCACTGGTGGCTACTATGTCCAGCACGTACCAAAGGTGATGCAGTGGTTGAAGTATTTGTCTTTCGTGTACTATGGCTTCAGACTTCTTCTGAAAGTGCAGTATTCAGGAGAACAACTATATGAGTGTGAAAGCGAGAGAGGGTGCAGAACATTGCAGAGTTCACCATCATTTGACACAGTAAACTTGAAAGGAGGCTTAACTGAAGCATGGATTCTGGTAGCCATGGCTCTGTGCTTCCGTGTCTTGGCCTATTTCTGTCTCCGCAGACGAATTGAAGTTCGAAATTAG 2085 0.4206 MENEREDEIEDMSTSPPSLGSMQFAGSNGFGHSMEFMSQAYLPNIYTEIDIKIEDSNFNQDPPLPIYLKFEDVEYKVRGSHAASTNPVKSVMSKVAIQHNLGEDKYKKILKGMTGSIGPGEILALMGPSGSGKTTLLRVVGGRLVDNVKGKITYNDVRFNAAVKRRLDYFLCYRIGFVTQEDVLFPQLTVEETLIFSAFLRLPGNMSEQQKYARVETTIKELGLERCRHTKIGGGYLKSISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTAANRLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKAKDSMPYFSSLSFTPEIPMNPAEFMLDLATGQVNNISFPQDIFKDQESTDRSKSVIKYLQLKYKETLEPKEKDENHGATNTPEHLQLAIQVKKDWTVSWLDQFFILYKRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQVRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYVSSTLCDMVAHVFYPTFFMLILYFMAGFKRTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGIVASLILMLFLLTGGYYVQHVPKVMQWLKYLSFVYYGFRLLLKVQYSGEQLYECESERGCRTLQSSPSFDTVNLKGGLTEAWILVAMALCFRVLAYFCLRRRIEVRN 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03003 694 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 68 340 IPR003439 GO:0005524
Viun8g03003 694 Gene3D - 93 332 IPR027417 -
Viun8g03003 694 FunFam ABC transporter G family member 22 97 334 - -
Viun8g03003 694 Coils Coil 689 694 - -
Viun8g03003 694 Pfam ABC-2 type transporter 425 633 IPR013525 GO:0016020|GO:0140359
Viun8g03003 694 Pfam ABC transporter 110 268 IPR003439 GO:0005524
Viun8g03003 694 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 682 - -
Viun8g03003 694 SMART AAA_5 119 318 IPR003593 GO:0016887
Viun8g03003 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 332 IPR027417 -
Viun8g03003 694 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03003 Viun-Chr8 37342288 37346084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03003 108 301 Calmodulin-binding Proteins AT2G36910 30.256 4.47e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03003 K05681 - gmx:100815259 1223.38