Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02937 ATGGCTGCTTCTGTGTCTCTCTATCCCTATAAACCCCTGCTATACTTTTCGACTCCTTCGTGTTTTCAGTCCCAATTTCGGAACTTGGAGAGAGGGAAATTGGATTCTGCAAGGTTGAAGAGTTTAGTGAAACTTGCAGCACATTCAAATCCGAAAATTATCAAAACCAACAGGAAGTCAAAGTATGGAGGGGCACTGTCGATGTACGATAGTGATGAAGACGATGAAGAAACGGACGAGGAGGAGGACGACGAAGATGATGATGATTGGCTTTCTGATGAGGAATTTGCTGAGCCTGCTAAATTTGATGTTAGGAACAAGAGATTGAAGTCGAAGACAGTTAAAGGAAAGGATAAAGAGAAGGAGTGGGAGTGGGGTTTGAGATCTTTGGACAACGAACAAAGCATTAGATTGCCTAGAAGTGAGAGAGTGGCATCCTTGCAACGAAATGAGAGTGGAAAGGCACCAAATGGTGATAAGGTTAGTAGAAATGTAAAGAACAAAAAGTATCCGCGGTTGTCTGAAGAAATTCCTTTGGATTCGAAATGGTTACCACTTCTTGATTACTTGAGCACCTTTGGAATGAAGGAGTCACACTTTGTCCAAATATATGAGAGGCACATGCAAGCACTTCAAATTAATGTTGGTTCAGCACAGGAAAGGTTAGAATACTTATTGAGTGTTGGTGTTAAACATAGAGATGTAAGAAGAATCCTATTGAGGCAGCCACAAATTCTTGAGTATACAGTGGAGAACAATTTGAAGTCTCGTGTTGCTTTCTTGAGGGGCCTGGGCATACCGAATTCTAGAATAGGGCAAATCATTGCTGCTGCTCCGTCTTTGTTTTCTTACAGTGTTGAGAATTCATTAAAACCTACAGTTAGATATTTAGTTGAGGAAGTAGGCATCAAGGAAAAAGATTTGGGTAAGGTCATTCAGCTCAGTCCCCAAATTCTTGTGCAAAGAATTGACATTTCATGGAATATGCGTTATATGTTTCTTACCAAGGAGTTGGGTGCACCCAGGGATAGCATTGTGAAGATGGTGACAAAACATCCCCAACTTCTCCATTACAGCATAGATGATGGATTACTTCCAAGAATAAATTTCTTAAGGAGCATAGGAATGAAAAATTCAGATATCTTGAAAGTATTGACCAGCCTTACACAGGTGCTATCTCTGTCATTGGAGGAAAATCTAAAGCCCAAATATTTGTACTTGGTAAATGAACTTAACAATGAGGTGCAATCCTTGACCAAGTACCCAATGTATCTTAGTTTATCCTTGGACCAGAGAATTCGTCCTCGTCATAGGTTCTTAGTTTCCCTAAAGAAAGCTCCAAAAGGACCATTTCCCCTTGGATCTTTTGTACCAACTGATGAATGTTTTTGCGAACAGTGGGCTGGAACAAGTTTGGATAAATATTTGGCATTCCGTCAGAGATTATTGCTTCAAAAGTTTGCTGAGAAATATGAAAGAAAAATGTGA 1488 0.3999 MAASVSLYPYKPLLYFSTPSCFQSQFRNLERGKLDSARLKSLVKLAAHSNPKIIKTNRKSKYGGALSMYDSDEDDEETDEEEDDEDDDDWLSDEEFAEPAKFDVRNKRLKSKTVKGKDKEKEWEWGLRSLDNEQSIRLPRSERVASLQRNESGKAPNGDKVSRNVKNKKYPRLSEEIPLDSKWLPLLDYLSTFGMKESHFVQIYERHMQALQINVGSAQERLEYLLSVGVKHRDVRRILLRQPQILEYTVENNLKSRVAFLRGLGIPNSRIGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIKEKDLGKVIQLSPQILVQRIDISWNMRYMFLTKELGAPRDSIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSFVPTDECFCEQWAGTSLDKYLAFRQRLLLQKFAEKYERKM 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02937 495 MobiDBLite consensus disorder prediction 139 157 - -
Viun8g02937 495 MobiDBLite consensus disorder prediction 64 92 - -
Viun8g02937 495 Gene3D Transcription termination factor 3, mitochondrial 246 482 IPR038538 -
Viun8g02937 495 SMART mt_12 236 267 IPR003690 GO:0003690|GO:0006355
Viun8g02937 495 SMART mt_12 382 414 IPR003690 GO:0003690|GO:0006355
Viun8g02937 495 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Viun8g02937 495 SMART mt_12 415 446 IPR003690 GO:0003690|GO:0006355
Viun8g02937 495 SMART mt_12 272 304 IPR003690 GO:0003690|GO:0006355
Viun8g02937 495 SMART mt_12 309 341 IPR003690 GO:0003690|GO:0006355
Viun8g02937 495 SMART mt_12 346 377 IPR003690 GO:0003690|GO:0006355
Viun8g02937 495 MobiDBLite consensus disorder prediction 69 92 - -
Viun8g02937 495 Pfam mTERF 187 261 IPR003690 GO:0003690|GO:0006355
Viun8g02937 495 Pfam mTERF 250 442 IPR003690 GO:0003690|GO:0006355
Viun8g02937 495 PANTHER CGI-12 PROTEIN-RELATED 181 466 IPR003690 GO:0003690|GO:0006355
Viun8g02937 495 MobiDBLite consensus disorder prediction 139 165 - -
Viun8g02937 495 Coils Coil 201 221 - -
Viun8g02937 495 FunFam Transcription termination factor MTERF9, chloroplastic 247 482 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun8g02937 mTERF 4.7e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02937 K15032 - gmx:102660933 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02937 8 37009977 37012782 Viun8g02937 8 37009977 37012782 ECH