Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02934 ATGTCTCAGAAGCATAAAATGTCCTACGAGGCTGTCCAAAATCTTGGGTCATGCTGCTTCCTACAAAGTGAGAACCTAGACTACTATTCATCCTCTGATAACAGCAGCCATGCAACCTACCCTTCTGTTCGTACTTTAGAACAATATTGCACCCTGGAATCTTCTACAAAGAACAGTTTTCCTTCCCTAAATTCTCCATCTACTGTTAGCTTCTCACCTAACTATAGCCCACTCTCAAAGCTACAGCCAAAATCATATGTGTTGAGTTCACATAATTCTCTTGAAATTGCTAATGATTCACTGGAAAATGAATCTTGTTTGACGCATAATGACAATGAGCTGAGGCACAAGATAAGAGAGCTTGAAAGTGCTATGTTGGGACATGATGCAGATATTCTGGATATGTATGATACTGTGATTCCAGAGGAATCTCATTCATTTTTGCTGGAGGCAGAAAGGTGGAAGAAAATGATGGAGATGATATCTAGAGGGGATTTGAAGGAGATGCTTTGTGCATGTGCAATAGCAGTGGCAGGAAATGATATGGAGACAACCGAATGGTTGATGTCAGAGTTAAGAAAAATGGTCTCAGTTTCTGGCAATCCAATCCAACGATTGGGAGCATACATGTTGGAGGCTCTTGTTGCAAGATTGGCCTCTTCAGGAAGCACAATCTACAAAGCCTTGAAATGTAAAGAGCCTACTGGTAGGGAACTCCTTTCACACATGCACCTACTTTATGAAATTTGCCCATATCTCAAATTTGGTTACATGTCTGCAAATGGGGCTATTGCTGAAGTCATGAAGGGGGAAAGTGAAGTCCACATAATTGATTTTCAGATCAACCAGGGAATACAATGGGTGAGCCTAATCCAAGCTCTTGCTGGCAGATATGGAGGACCCCCCAAGATCAGAATAACAGGTTTTGATGACTCAACTTCAGCTTATGCCAGGGAAGGAGGTCTTGAAATTGTGGGAGAAAGGTTGTCAGCACTTGCACAATCATATAATGTACCCTTTGAGTTCCGTGCCTTAGAAGTTTCTCCCACTGAGGTTGATATTAAAGACCTTGAACTTCGACCTGGTGAAGCTATTGCAGTGAATTTTGCCATGATGCTGCACCATCTTCCAGATGAGAGTGTGGATGGTCAGAACCATCGTGGCCGGTTGTTGAGACTGGCAAAGTGTTTGTCTCCAAAGATCGTGACACTAGTTGAGCAAGAATCACATACCAGCAACCTCCCATTCTTCCCCCGTTTTGTTGAGACAATGAACTACTACTTGGCTATTTTCGAATCGATTGATGTTGCTCTTCCAAAGGAAAACAAAGAGAGGATTAACGTGGAACAGCATTGTTTGGCTCGAGAAGTTGTCAACTTAGTAGCATGTGAAGGGGCAGAAAGAGTGGAACGCCACGAGCTTCTCAAGAACTGGAGATCACGTTTCACCATGGCTGGATTCTCAACATATCCATTGAACTCCTTTATTACTAGTTCGATTAAAAATCTTCAGCAAAGCTACCAGGGACATTACACTCTAGAAGAGAGAGATGGAGCTCTATGTCTTGGTTGGATGAATCAAGTTCTTATTACTTCTTGTGCTTGGAGGTGA 1611 0.4246 MSQKHKMSYEAVQNLGSCCFLQSENLDYYSSSDNSSHATYPSVRTLEQYCTLESSTKNSFPSLNSPSTVSFSPNYSPLSKLQPKSYVLSSHNSLEIANDSLENESCLTHNDNELRHKIRELESAMLGHDADILDMYDTVIPEESHSFLLEAERWKKMMEMISRGDLKEMLCACAIAVAGNDMETTEWLMSELRKMVSVSGNPIQRLGAYMLEALVARLASSGSTIYKALKCKEPTGRELLSHMHLLYEICPYLKFGYMSANGAIAEVMKGESEVHIIDFQINQGIQWVSLIQALAGRYGGPPKIRITGFDDSTSAYAREGGLEIVGERLSALAQSYNVPFEFRALEVSPTEVDIKDLELRPGEAIAVNFAMMLHHLPDESVDGQNHRGRLLRLAKCLSPKIVTLVEQESHTSNLPFFPRFVETMNYYLAIFESIDVALPKENKERINVEQHCLAREVVNLVACEGAERVERHELLKNWRSRFTMAGFSTYPLNSFITSSIKNLQQSYQGHYTLEERDGALCLGWMNQVLITSCAWR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02934 536 ProSiteProfiles GRAS family profile. 157 536 IPR005202 -
Viun8g02934 536 Pfam GRAS domain family 167 536 IPR005202 -
Viun8g02934 536 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 115 530 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02934 Viun-Chr8 37001307 37004332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02934 42 536 GRAS Transcription Factor Family AT1G50600 59.082 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun8g02934 GRAS 1.4e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02934 - - gmx:100779977 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02934 8 37001307 37004332 Viun8g02934 8 37001307 37004332 ECH
Viun6g00907 6 18768734 18771968 Viun8g02934 8 37001307 37004332 PCT