Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02932 ATGCAATATCGGCAGCAGGAGAAAGTGGAGTCTTCACCAACTACAGGGTCTCTCCGGAAGCTTCAACAAACAGTACATGGTTCTAAGGCTTCTGCTACATTTGCATTAACCACTGCATGCTTCAATACCAATACTGTTGATGACAGGAAATCAAGCTTCTTTGAGTTTAAACCACTCAACAGGTTGAATATGGTTCCTGTAGACTTCAATAACCATGTTATCAAACAATCAACTCAAGTAGAAGGTCTAGGAAAAGCACAATCATTTGTTTCCTCACCATTAGGTGAAAGTGAGATAGCAGTTCCTGCTAACGAATTAAGTCTATCATCACCTGTACAAATGGTTAGTTCTAGTCCTAGTGCTCCTGTTGATGTTGATTTGGATGACGTTAACCACAAAAGCAACACAGCTACTGGGCTTCAAGCATCACATGTTGAGGTTAGAGGCAATGGACTTTCAGTTGCAGCTGAGAAAACATCTGATGATGGATACAATTGGCGAAAGTACGGGCAAAAACTTGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCAAACTGTGAAGTGAAAAAACTTTTTGAACGCTCTCATGATGGTCAAATCACTGAGATAATTTACAAGGGAACACATGATCACCCCAAACCTCAACCAAGCTGCCGATACTCTACTGGTACTGTTATGTCTATTCAAGTAGAGAGATCCGATAAGGATTCTTCTTTGGCTGGCCTAGATGACAAAGCATCCTCCATGTATGGTCAGTTGTCTCATGCTGCTGAGCCCAACAGTGCTTCTGAGCCATCACCTGTAGCAACAAACGATGATGGTTTAGAGGGTGTCGGGTTTGCGTCAAACAGGATTAGTGATGACGCTGATGATGATGATCCCTTCTCAAAGCGGAGAAAAATGGAACTTGGAAATGTTGACATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTTTGAGTGAGGTTGATATATTGGATGATGGGTATCGCTGGCGTAAGTATGGCCAAAAGGTGGTGAGAGGCAATCCTAACCCAAGGAGTTATTACAAATGCACAAATGCGGGTTGCCCTGTCAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCAGTGATAACCACATATGAGGGTAAACACAACCATGATGTACCAGCTGCAAAGAATAGCAGCCATGACATGGCAGTAGCAGCAGCTGGACAGACAAGAATTAAGTTAGAAGAAAGTGATACCATTAGCCTTGACCTTGGGATGGGAATTAGCTCAGCTGCTGAACATAGATCAAATGCACAAGGGAAAATAATGCACTCTGAATTTGGGAACACTCAAACTCACACAAGTAATTCCAATTTCAAGTTTGTTCATACTACCTCAGCTCCAGTATACTTTGGTGTTCTAAATAACAGCTCTAATCCCTATGGTTCTAGAGACAATAGGACTGATGGTCCGGCTTTAAACCATGCCTCGTATCCTTGCCCACAGAGCATGGGAAGAATACTAATGGGTCCATGA 1545 0.4265 MQYRQQEKVESSPTTGSLRKLQQTVHGSKASATFALTTACFNTNTVDDRKSSFFEFKPLNRLNMVPVDFNNHVIKQSTQVEGLGKAQSFVSSPLGESEIAVPANELSLSSPVQMVSSSPSAPVDVDLDDVNHKSNTATGLQASHVEVRGNGLSVAAEKTSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSCRYSTGTVMSIQVERSDKDSSLAGLDDKASSMYGQLSHAAEPNSASEPSPVATNDDGLEGVGFASNRISDDADDDDPFSKRRKMELGNVDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAAKNSSHDMAVAAAGQTRIKLEESDTISLDLGMGISSAAEHRSNAQGKIMHSEFGNTQTHTSNSNFKFVHTTSAPVYFGVLNNSSNPYGSRDNRTDGPALNHASYPCPQSMGRILMGP 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02932 514 FunFam WRKY transcription factor 150 220 - -
Viun8g02932 514 MobiDBLite consensus disorder prediction 1 20 - -
Viun8g02932 514 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 117 437 IPR044810 GO:0003700
Viun8g02932 514 SMART WRKY_cls 336 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02932 514 SMART WRKY_cls 160 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02932 514 Pfam WRKY DNA -binding domain 337 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02932 514 Pfam WRKY DNA -binding domain 161 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02932 514 ProSiteProfiles WRKY domain profile. 331 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02932 514 MobiDBLite consensus disorder prediction 257 303 - -
Viun8g02932 514 MobiDBLite consensus disorder prediction 258 273 - -
Viun8g02932 514 SUPERFAMILY WRKY DNA-binding domain 157 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02932 514 ProSiteProfiles WRKY domain profile. 155 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02932 514 Gene3D WRKY domain 152 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02932 514 Gene3D WRKY domain 321 397 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02932 514 SUPERFAMILY WRKY DNA-binding domain 328 396 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02932 514 FunFam WRKY transcription factor 33 323 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02932 Viun-Chr8 36993766 36997645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02932 8 514 WRKY Transcription Factor Family AT4G26640 53.891 1.13e-164 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun8g02932 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02932 - - gmx:100816583 908.286