Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02931 ATGCTGGTGGAGTCTTCACCAACTACAGGGTCTCTCCGGAAGCTTCAACAAACAGTACATGGTTCTAAGGCTTCTGCTACATTTGCATTAACCACTGCATGCTTCAATACCAATACTGTTGATGACAGGAAATCAAGCTTCTTTGAGTTTAAACCACTCAACAGGTTGAATATGGTTCCTGTAGACTTCAATAACCATGTTATCAAACAATCAACTCAAGTAGAAGGTCTAGGAAAAGCACAATCATTTGTTTCCTCACCATTAGGTGAAAGTGAGATAGCAGTTCCTGCTAACGAATTAAGTCTATCATCACCTGTACAAATGGTTAGTTCTAGTCCTAGTGCTCCTGTTGATGTTGATTTGGATGACGTTAACCACAAAAGCAACACAGCTACTGGGCTTCAAGCATCACATGTTGAGGTTAGAGGCAATGGACTTTCAGTTGCAGCTGAGAAAACATCTGATGATGGATACAATTGGCGAAAGTACGGGCAAAAACTTGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCAAACTGTGAAGTGAAAAAACTTTTTGAACGCTCTCATGATGGTCAAATCACTGAGATAATTTACAAGGGAACACATGATCACCCCAAACCTCAACCAAGCTGCCGATACTCTACTGGTACTGTTATGTCTATTCAAGTAGAGAGATCCGATAAGGATTCTTCTTTGGCTGGCCTAGATGACAAAGCATCCTCCATGTATGGTCAGTTGTCTCATGCTGCTGAGCCCAACAGTGCTTCTGAGCCATCACCTGTAGCAACAAACGATGATGGTTTAGAGGGTGTCGGGTTTGCGTCAAACAGGATTAGTGATGACGCTGATGATGATGATCCCTTCTCAAAGCGGAGAAAAATGGAACTTGGAAATGTTGACATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTTTGAGTGAGGTTGATATATTGGATGATGGGTATCGCTGGCGTAAGTATGGCCAAAAGGTGGTGAGAGGCAATCCTAACCCAAGGAGTTATTACAAATGCACAAATGCGGGTTGCCCTGTCAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCAGTGATAACCACATATGAGGGTAAACACAACCATGATGTACCAGCTGCAAAGAATAGCAGCCATGACATGGCAGTAGCAGCAGCTGGACAGACAAGAATTAAGTTAGAAGAAAGTGATACCATTAGCCTTGACCTTGGGATGGGAATTAGCTCAGCTGCTGAACATAGATCAAATGCACAAGGGAAAATAATGCACTCTGAATTTGGGAACACTCAAACTCACACAAGTAATTCCAATTTCAAGTTTGTTCATACTACCTCAGCTCCAGTATACTTTGGTGTTCTAAATAACAGCTCTAATCCCTATGGTTCTAGAGACAATAGGACTGATGGTCCGGCTTTAAACCATGCCTCGTATCCTTGCCCACAGAGCATGGGAAGAATACTAATGGGTCCATGA 1527 0.4263 MLVESSPTTGSLRKLQQTVHGSKASATFALTTACFNTNTVDDRKSSFFEFKPLNRLNMVPVDFNNHVIKQSTQVEGLGKAQSFVSSPLGESEIAVPANELSLSSPVQMVSSSPSAPVDVDLDDVNHKSNTATGLQASHVEVRGNGLSVAAEKTSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSCRYSTGTVMSIQVERSDKDSSLAGLDDKASSMYGQLSHAAEPNSASEPSPVATNDDGLEGVGFASNRISDDADDDDPFSKRRKMELGNVDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAAKNSSHDMAVAAAGQTRIKLEESDTISLDLGMGISSAAEHRSNAQGKIMHSEFGNTQTHTSNSNFKFVHTTSAPVYFGVLNNSSNPYGSRDNRTDGPALNHASYPCPQSMGRILMGP 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02931 508 SUPERFAMILY WRKY DNA-binding domain 151 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02931 508 MobiDBLite consensus disorder prediction 252 267 - -
Viun8g02931 508 SUPERFAMILY WRKY DNA-binding domain 322 390 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02931 508 ProSiteProfiles WRKY domain profile. 325 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02931 508 SMART WRKY_cls 154 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02931 508 SMART WRKY_cls 330 389 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02931 508 FunFam WRKY transcription factor 33 317 383 - -
Viun8g02931 508 FunFam WRKY transcription factor 144 214 - -
Viun8g02931 508 Gene3D WRKY domain 315 391 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02931 508 Gene3D WRKY domain 146 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02931 508 Pfam WRKY DNA -binding domain 331 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02931 508 Pfam WRKY DNA -binding domain 155 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02931 508 ProSiteProfiles WRKY domain profile. 149 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02931 508 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 111 431 IPR044810 GO:0003700
Viun8g02931 508 MobiDBLite consensus disorder prediction 251 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02931 Viun-Chr8 36993011 36997645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02931 4 508 WRKY Transcription Factor Family AT4G26640 53.906 1.40e-164 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun8g02931 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02931 - - gmx:100816583 907.516