Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02929 ATGGACGCCTCCACCGCCACCACCTCCGCCGAGCCCAGCCCAAGTTCGGAGCTCTGCCTCAACGGGGCATCCGAGGATCCGAATCGAGGTGGCTCGGGTCAGAATTCCACGGCGAGGTACAAGCTGATTGCGCCGGCGAAGCTTCCGATCTCGAGGTCGCCCTGCATCACGATTCCTCCGGGACTGAGTCCTACGTCGTTTCTGGAATCACCGGTTCTTCTCTCCAACATGAAGGTGGAGTCTTCACCAACTACAGGGTCTCTCCGGAAGCTTCAACAAACAGTACATGGTTCTAAGGCTTCTGCTACATTTGCATTAACCACTGCATGCTTCAATACCAATACTGTTGATGACAGGAAATCAAGCTTCTTTGAGTTTAAACCACTCAACAGGTTGAATATGGTTCCTGTAGACTTCAATAACCATGTTATCAAACAATCAACTCAAGTAGAAGGTCTAGGAAAAGCACAATCATTTGTTTCCTCACCATTAGGTGAAAGTGAGATAGCAGTTCCTGCTAACGAATTAAGTCTATCATCACCTGTACAAATGGTTAGTTCTAGTCCTAGTGCTCCTGTTGATGTTGATTTGGATGACGTTAACCACAAAAGCAACACAGCTACTGGGCTTCAAGCATCACATGTTGAGGTTAGAGGCAATGGACTTTCAGTTGCAGCTGAGAAAACATCTGATGATGGATACAATTGGCGAAAGTACGGGCAAAAACTTGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCAAACTGTGAAGTGAAAAAACTTTTTGAACGCTCTCATGATGGTCAAATCACTGAGATAATTTACAAGGGAACACATGATCACCCCAAACCTCAACCAAGCTGCCGATACTCTACTGACAAAGCATCCTCCATGTATGGTCAGTTGTCTCATGCTGCTGAGCCCAACAGTGCTTCTGAGCCATCACCTGTAGCAACAAACGATGATGGTTTAGAGGGTGTCGGGTTTGCGTCAAACAGGATTAGTGATGACGCTGATGATGATGATCCCTTCTCAAAGCGGAGAAAAATGGAACTTGGAAATGTTGACATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTTTGAGTGAGGTTGATATATTGGATGATGGGTATCGCTGGCGTAAGTATGGCCAAAAGGTGGTGAGAGGCAATCCTAACCCAAGGAGTTATTACAAATGCACAAATGCGGGTTGCCCTGTCAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCAGTGATAACCACATATGAGGGTAAACACAACCATGATGTACCAGCTGCAAAGAATAGCAGCCATGACATGGCAGTAGCAGCAGCTGGACAGACAAGAATTAAGTTAGAAGAAAGTGATACCATTAGCCTTGACCTTGGGATGGGAATTAGCTCAGCTGCTGAACATAGATCAAATGCACAAGGGAAAATAATGCACTCTGAATTTGGGAACACTCAAACTCACACAAGTAATTCCAATTTCAAGTTTGTTCATACTACCTCAGCTCCAGTATACTTTGGTGTTCTAAATAACAGCTCTAATCCCTATGGTTCTAGAGACAATAGGACTGATGGTCCGGCTTTAAACCATGCCTCGTATCCTTGCCCACAGAGCATGGGAAGAATACTAATGGGTCCATGA 1692 0.4521 MDASTATTSAEPSPSSELCLNGASEDPNRGGSGQNSTARYKLIAPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVESSPTTGSLRKLQQTVHGSKASATFALTTACFNTNTVDDRKSSFFEFKPLNRLNMVPVDFNNHVIKQSTQVEGLGKAQSFVSSPLGESEIAVPANELSLSSPVQMVSSSPSAPVDVDLDDVNHKSNTATGLQASHVEVRGNGLSVAAEKTSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSCRYSTDKASSMYGQLSHAAEPNSASEPSPVATNDDGLEGVGFASNRISDDADDDDPFSKRRKMELGNVDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAAKNSSHDMAVAAAGQTRIKLEESDTISLDLGMGISSAAEHRSNAQGKIMHSEFGNTQTHTSNSNFKFVHTTSAPVYFGVLNNSSNPYGSRDNRTDGPALNHASYPCPQSMGRILMGP 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02929 563 SUPERFAMILY WRKY DNA-binding domain 377 445 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02929 563 SMART WRKY_cls 385 444 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02929 563 SMART WRKY_cls 230 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02929 563 ProSiteProfiles WRKY domain profile. 380 445 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02929 563 FunFam WRKY transcription factor 33 372 438 - -
Viun8g02929 563 Gene3D WRKY domain 222 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02929 563 Gene3D WRKY domain 370 446 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02929 563 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 148 486 IPR044810 GO:0003700
Viun8g02929 563 MobiDBLite consensus disorder prediction 1 36 - -
Viun8g02929 563 Pfam WRKY DNA -binding domain 231 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02929 563 Pfam WRKY DNA -binding domain 386 442 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02929 563 ProSiteProfiles WRKY domain profile. 225 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02929 563 MobiDBLite consensus disorder prediction 281 328 - -
Viun8g02929 563 MobiDBLite consensus disorder prediction 294 322 - -
Viun8g02929 563 FunFam WRKY transcription factor 220 290 - -
Viun8g02929 563 SUPERFAMILY WRKY DNA-binding domain 227 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02929 Viun-Chr8 36992179 36997645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02929 43 563 WRKY Transcription Factor Family AT4G26640 53.931 4.56e-177 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun8g02929 WRKY 1.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02929 - - gmx:100816583 991.104