Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02927 ATGCCTGATAAATTATTGGATGATCTGTGTTCACAATTCCAGATGCCGTTTGTTAACCCTGACCCTTCAGACAAAGATTCTGAGCCCTTTGTTGAGACAGATCCAACTGGTCGCTATGGTAGATACAGTGAGTTGCTTGGGAGTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGATCAGGAAGAAGGAATAGAGGTGGCTTGGAACCAAGTGAAGCTGAGGAACTTCTGTGATGACCCTACCATGGTGGATAGGCTTTACTCTGAAGTGAGATTGCTCAGAAGCTTGACCAACAAAAACATCATCGCACTTTACAGTGTGTGGAGGGATGACCAGCGCAACACTTTGAATTTCATCACTGAGGTTTGTACCAGTGGTGATTTGAGGGAGTATAGGAAGAGGCACAGGCATGTTTCCATGAAGGCCCTCAAGAAGTGGTCCAAGCAGATTCTGAAAGGGCTGAATTATCTGCACTTGCATGATCCCTGCATCATTCACAGAGATCTCAATTGCAGCAATGTGTTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGCAGGAGCCATTGTGCTCACACTATTCTTGGCACACCAGAATTCATGGCTCCGGAGTTATATGATGAAGACTACACTGAGTTGGTGGACATTTATTCATTCGGCATGTGTTTGCTGGAAATGGTGACACTGGAGATTCCTTACAGTGAATGTGACAATGTTGCAAAGATATACAAGAAGGTGTGTTCTGGAGTTAGACCTGCAGCCCTGAACAAAGTGAAAGATCCAGAGGTGAAGGCCTTCATTGAGAAGTGCCTTGCTCAGCCAAGAGCAAGACCTTCTGCAGCTGAACTTCTCAAAGATCCCTTCTTTGATGAGATTGTTGATGATGACGAAAATGATGACTGTTCTTCTTCTCACCAGTAA 948 0.4504 MPDKLLDDLCSQFQMPFVNPDPSDKDSEPFVETDPTGRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDDPTMVDRLYSEVRLLRSLTNKNIIALYSVWRDDQRNTLNFITEVCTSGDLREYRKRHRHVSMKALKKWSKQILKGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGRSHCAHTILGTPEFMAPELYDEDYTELVDIYSFGMCLLEMVTLEIPYSECDNVAKIYKKVCSGVRPAALNKVKDPEVKAFIEKCLAQPRARPSAAELLKDPFFDEIVDDDENDDCSSSHQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02927 315 Gene3D Transferase(Phosphotransferase) domain 1 123 304 - -
Viun8g02927 315 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 24 301 - -
Viun8g02927 315 Gene3D Phosphorylase Kinase; domain 1 24 121 - -
Viun8g02927 315 CDD STKc_WNK 38 298 - -
Viun8g02927 315 Pfam Protein kinase domain 43 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02927 315 FunFam probable serine/threonine-protein kinase WNK9 123 304 - -
Viun8g02927 315 FunFam Probable serine/threonine-protein kinase WNK1 24 121 - -
Viun8g02927 315 ProSiteProfiles Protein kinase domain profile. 40 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02927 315 SUPERFAMILY Protein kinase-like (PK-like) 31 304 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02927 Viun-Chr8 36977648 36979985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02927 19 302 MAP Kinase Kinase Kinase AT5G55560 81.338 0.0 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun8g02927 Pkinase 2.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02927 K08867 - gmx:100786910 561.992