Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02926 ATGCCGTTTGTTAACCCTGACCCTTCAGACAAAGATTCTGAGCCCTTTGTTGAGACAGATCCAACTGGTCGCTATGGTAGATACAGTGAGTTGCTTGGGAGTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGATCAGGAAGAAGGAATAGAGGTGGCTTGGAACCAAGTGAAGCTGAGGAACTTCTGTGATGACCCTACCATGGTGGATAGGCTTTACTCTGAAGTGAGATTGCTCAGAAGCTTGACCAACAAAAACATCATCGCACTTTACAGTGTGTGGAGGGATGACCAGCGCAACACTTTGAATTTCATCACTGAGGTTTGTACCAGTGGTGATTTGAGGGAGTATAGGAAGAGGCACAGGCATGTTTCCATGAAGGCCCTCAAGAAGTGGTCCAAGCAGATTCTGAAAGGGCTGAATTATCTGCACTTGCATGATCCCTGCATCATTCACAGAGATCTCAATTGCAGCAATGTGTTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGCAGGAGCCATTGTGCTCACACTATTCTTGGCACACCAGAATTCATGGCTCCGGAGTTATATGATGAAGACTACACTGAGTTGGTGGACATTTATTCATTCGGCATGTGTTTGCTGGAAATGGTGACACTGGAGATTCCTTACAGTGAATGTGACAATGTTGCAAAGATATACAAGAAGGTGTGTTCTGGAGTTAGACCTGCAGCCCTGAACAAAGTGAAAGATCCAGAGGTGAAGGCCTTCATTGAGAAGTGCCTTGCTCAGCCAAGAGCAAGACCTTCTGCAGCTGAACTTCTCAAAGATCCCTTCTTTGATGAGATTGTTGATGATGACGAAAATGATGACTGTTCTTCTTCTCACCAGTAA 906 0.4547 MPFVNPDPSDKDSEPFVETDPTGRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDDPTMVDRLYSEVRLLRSLTNKNIIALYSVWRDDQRNTLNFITEVCTSGDLREYRKRHRHVSMKALKKWSKQILKGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGRSHCAHTILGTPEFMAPELYDEDYTELVDIYSFGMCLLEMVTLEIPYSECDNVAKIYKKVCSGVRPAALNKVKDPEVKAFIEKCLAQPRARPSAAELLKDPFFDEIVDDDENDDCSSSHQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02926 301 FunFam probable serine/threonine-protein kinase WNK9 109 290 - -
Viun8g02926 301 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
Viun8g02926 301 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02926 301 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 287 - -
Viun8g02926 301 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02926 301 SUPERFAMILY Protein kinase-like (PK-like) 20 290 IPR011009 -
Viun8g02926 301 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Viun8g02926 301 CDD STKc_WNK 24 284 - -
Viun8g02926 301 PIRSF TyrPK_CSF1-R 121 300 - -
Viun8g02926 301 PIRSF TyrPK_CSF1-R 26 131 - -
Viun8g02926 301 MobiDBLite consensus disorder prediction 1 22 - -
Viun8g02926 301 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02926 Viun-Chr8 36977648 36980164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02926 5 288 MAP Kinase Kinase Kinase AT5G55560 81.338 0.0 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun8g02926 Pkinase 2.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02926 K08867 - gmx:100786910 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02926 8 36977648 36980164 Viun8g02926 8 36977648 36980164 ECH
Viun6g00899 6 18733137 18735279 Viun8g02926 8 36977648 36980164 PCT