Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02925 ATGCAGAACAAAAGAGGTTTTTCTATGTTGAGGCTAATTTTCTTTGCTACCCTTTTCTTTATCATAGAATGTGCACGAGGTGAGTTATCAGAATCTGAGTCTTTCTTCAATTTCCTGAGAGCAGTTGATCCACAAAACGTGCTTAACAAAACTACCTTGGTTGGATCATCATCACATTCGTGCTTTGTCAAGTTGAAAGGTGTAAGATGTGACTCAAATGCTACAAATATTGTACATATAAAGCTTGAGAACTTGAACCTAGGTGGCACAATTGATGCAGATTCACTATGCAGGCTCCGAAAGTTAAGAGTGGTGAGCTTGGCTGACAACAACATCAGAGGAACCATTCCACCTTCGATTTTGCATTGTACAAGGTTGACACATTTGAACTTAACCAGAAATCAATTGAGTGGAACTTTGCCAAAGGCCTTAACAAAATTGAAACATCTGAGGAACTTAGACATCTCCAATAACAACTTTTCTGGTATGATTCCTAGTAAACAACAATATAGGCGATTAGTTACTTATATTGTGACACCAAGTGTTAAGTTGGAAAACAATAGTACCAAAGAGGGGCTAAAAGAAAGTGACAAAAAAACAACACCAGATTCTTTATCAGACACTGCTGATAAAGCCAGAAAGTCTAAGAATTTGACTGAAACTTTGGTGGTGTTACTTCTGGGCACTGTGGTGCTTTTGTCATCCCTTTACTTTATGGTAAGAAAGTCATTAGATTTAACTGAAAGGAGAGAGGTAGTTAAAGAGAATCATGATGTGTCAAAGGCTCCATGTAAAGAAATTCAAGAGGTGATGAATAACCAAAAGGAAGGAGATTCTGAGCTTGTTTTCTTTGTTGAAGATCGTGAGAGGTTCACAATGGAGGACCTGCTTCGAGCCACTGCTGATTTGAGGAGTGAAGGCTTTTGCAGCAGCCTTTACAAGGTGAAACTGGAGAACAATGATCACTATGCAGTCAAAAGATTGAAGAACTTGCAGGTTTCCTTGGAAGAATTTGGTGAAACATTGAGGAAGATTAGTAACTTGAAGCATCAAAATATCCTCCCCCTTGTTGGTTATCGTTCCACCAGTGAAGAAAAATTCGTCATTTACAAATACCAGAACAATGGAAGCCTGCTTAATCTGTTAAACGATTATATAGCAGATAGAAAAGATTTCCCATGGAAACTGCGTCTGAACATAGCATGTGGAATTGCAAGGGGTTTGGCCTTCATATATAAGAAGTTAGATGAGAAAGAAGAGGTGATTCCTCATGGGAATCTGAAGCCATCAAACATCCTTCTAGATGAGAACAACGAGCCAGTGATAAGTGAGCATGGTTTATCAAAATTCATGGACCCAAATAGAGGTTTTCTGTTTTCCTCTCAGGGATACACAGCTCCTGAAAAGAGCCTAACAGAAAAGGGTGATGTGTACAGTTTTGGAGTGATTCTGCTTGAACTGCTAACTGGGAAAAGCACAGAGATTAGCAGAATAGACCTTCCAAGATGGGTGAGATCCATGGTGAGGGAGGAATGGACAGGGGAAGTTTTTGACAAGGAAGTTAGGGAGAATGAGCATCAATGGGCGTTTCCTCTTCTGAACATAGCCCTCTTGTGTGTGTCACGGTTTCAAGAAACTAGACCAACCACTGTGGATATTTTGCAGAAGATAGAGGAGATTATGGATCAACATGAACAATATCAGGAACGTTTTGCTTCCAAATGCTGTTCCAATGGATCCAACCGTGATGAGTGTTGTTCACTTCACAAAATCATACCTGAAACGTGGGATTCTCCAGGATCAAATTATTGA 1812 0.3968 MQNKRGFSMLRLIFFATLFFIIECARGELSESESFFNFLRAVDPQNVLNKTTLVGSSSHSCFVKLKGVRCDSNATNIVHIKLENLNLGGTIDADSLCRLRKLRVVSLADNNIRGTIPPSILHCTRLTHLNLTRNQLSGTLPKALTKLKHLRNLDISNNNFSGMIPSKQQYRRLVTYIVTPSVKLENNSTKEGLKESDKKTTPDSLSDTADKARKSKNLTETLVVLLLGTVVLLSSLYFMVRKSLDLTERREVVKENHDVSKAPCKEIQEVMNNQKEGDSELVFFVEDRERFTMEDLLRATADLRSEGFCSSLYKVKLENNDHYAVKRLKNLQVSLEEFGETLRKISNLKHQNILPLVGYRSTSEEKFVIYKYQNNGSLLNLLNDYIADRKDFPWKLRLNIACGIARGLAFIYKKLDEKEEVIPHGNLKPSNILLDENNEPVISEHGLSKFMDPNRGFLFSSQGYTAPEKSLTEKGDVYSFGVILLELLTGKSTEISRIDLPRWVRSMVREEWTGEVFDKEVRENEHQWAFPLLNIALLCVSRFQETRPTTVDILQKIEEIMDQHEQYQERFASKCCSNGSNRDECCSLHKIIPETWDSPGSNY 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02925 603 SUPERFAMILY L domain-like 58 167 - -
Viun8g02925 603 Gene3D Transferase(Phosphotransferase) domain 1 374 582 - -
Viun8g02925 603 Pfam Leucine rich repeat 100 160 IPR001611 GO:0005515
Viun8g02925 603 MobiDBLite consensus disorder prediction 187 210 - -
Viun8g02925 603 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Viun8g02925 603 Gene3D Phosphorylase Kinase; domain 1 261 372 - -
Viun8g02925 603 MobiDBLite consensus disorder prediction 188 210 - -
Viun8g02925 603 Pfam Protein kinase domain 307 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02925 603 ProSiteProfiles Protein kinase domain profile. 298 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02925 603 SUPERFAMILY Protein kinase-like (PK-like) 290 557 IPR011009 -
Viun8g02925 603 PANTHER OS05G0588300 PROTEIN 12 566 - -
Viun8g02925 603 FunFam Leucine-rich repeat receptor protein kinase EMS1 93 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02925 Viun-Chr8 36972013 36974398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02925 12 560 Receptor kinase-like Gene Family AT5G53320 32.069 6.49e-79 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun8g02925 Pkinase 1.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02925 - - vra:106763201 1071.23