Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02917 ATGCCCAACCAAGATATTACCAGTTACCTTAAAGAACCTCGTCTTGTGGCCAGAAAGTTCTTGGCCAGACCTCAACATGAGGGTGTTGGGGCAGTTGTTAGAAGAAGCATAGGCAGATTTGAGCTCAAGAACTTTGACCCTTTCCTTGTCTTGGATGAATTCTCAGTCACTGCTCCTGCTGGGTTTCCTGATCATCCACACAGAGGATTTGAGACAGTCACATACATGTTGCAGGGATCCATAACACATGAAGATTTTGAAGGACGAAAGGGAACAATTGAAGCTGGTGATTTGCAATGGATGACTGCAGGAAGAGGGATAGTTCACTCAGAAATGCCTGCAGCACAAGGAACTCAAAAGGGTCTTCAGCTCTGGATCAACCTCTCTTCAAAACATAAAATGATTGAGCCAAGGTACCAAGAAATGCTGAGCAAGGACATAGCTGAAACTATGGTAGATGGAATAAAAGTTAGAGTGATAGCAGGTGAAGCTCTTGGAATAAAGTCTCCAATCTACACAAGAACACCAACCATGTACTTGGATTTTTCCCTCAAACCTGGTGCACACTTGCAGCAACTTATACCAAAATCATGGAATGCTTTTGTGTACATATTGGAAGGAGAAGGTGTTTTTGGGAACCAAAAGTCTCAACCTGTGACTTCACATCATATACTTCTTCTTGGTTCTGGGGATGGTCTTGAAGCATGGAACAAATCTTCAAAGGTTCTAAGGTTCATTTTGGTTGGAGGAGAACCATTGGGGGAACCTGTGGTGCAATTTGGACCCTTTGTGATGAACACTCAAGAAGAGATTGATCAAACAATTGATGATTTTGAGAATTATACCAATGGATTTGAGAAAGCAAGACACTGGAGGTCTGAAACTTCACTTAGCCTTGATTATTGA 906 0.4216 MPNQDITSYLKEPRLVARKFLARPQHEGVGAVVRRSIGRFELKNFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSITHEDFEGRKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKHKMIEPRYQEMLSKDIAETMVDGIKVRVIAGEALGIKSPIYTRTPTMYLDFSLKPGAHLQQLIPKSWNAFVYILEGEGVFGNQKSQPVTSHHILLLGSGDGLEAWNKSSKVLRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENYTNGFEKARHWRSETSLSLDY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02917 301 CDD cupin_pirin_C 176 252 - -
Viun8g02917 301 Pfam Pirin 33 126 IPR003829 -
Viun8g02917 301 CDD cupin_pirin_N 31 128 - -
Viun8g02917 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Viun8g02917 301 PIRSF Pirin 12 292 IPR012093 -
Viun8g02917 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Viun8g02917 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Viun8g02917 301 PANTHER PIRIN-RELATED 10 295 IPR012093 -
Viun8g02917 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Viun8g02917 301 FunFam pirin 27 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02917 Viun-Chr8 36919633 36922579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02917 13 289 Calmodulin-binding Proteins AT3G59220 59.140 3.69e-124 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02917 K06911 - gmx:100811930 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02917 8 36919633 36922579 Viun8g02917 8 36919633 36922579 ECH
Viun6g00860 6 18394799 18398407 Viun8g02917 8 36919633 36922579 PCT