Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02909 ATGAAGAGGGGTAGGTCATCATATTCCGATTGTGAAGAGGAGTACGAGTCTGAGATCCAGTCAATCTCTGTGTCAAATTACCATCTTGTAGACGACGAGGACAATCCTGTGTCTTTTGCTGTGTTGCCAATTCAATGGAATGATTCTGAGAACTCTAGTGCCTGCGAAGAGAAGGTGTTTCTACACGGTGATGCCGATAGCGGACTGTTGAAGACTTTCATGCAAGTGACGGCGTGGCGATTTGATCTTTCCAAAGCGAGACCTGAGGTATTCTTGCTGGCAAAGGATGGAAGGTGGGTCAAACTTCAGAAGCCTAGAAAGAGTTTTCAGGAAAAAGTAAGGACTGTTTTGATCACCCTTCACTTCCTCCATAGTGTGAAGGGACATGATCAAAAGTCTGTGGGATCTTTCTGGCAAGACTTGAGCAAGGATAAGGAATTGATCTCTTACGGTTCTAAGCCTTCAAAAAATGATTTATCGGACCACATGCTTTTGATTGGCGAAGCTTCCAAAAGGGATGCTGTCTTAGCAAAGTCCAAGCTTTTTCTCGTGGTTTTGGAGAAACTGAAGAGTCAAAAGCTTCTTAATGAGGAAGTTAATGATTTCGAACTGCCAGGATTTCCTGTTGTTGGAACTGACAGTGATATGATAGACAAATCTAATGAAGAGTCTGAAGAAACGGATGTTTTGGATGTTTGTGCACTTTGTGACAATGGTGGTAATGTTACATGTTGTGATGGCGTGTGCATGAGATCATTCCATGCTACTGTGGCAGCTGGTAGAGAAAATTGTTGTGTTTCTCTTGGTTTTACCCAGAAGGCAGTTGATGAGATCGACAACTTTTATTGCAAGAATTGTGAATATCGTCAGCACCAATGCTTTGCATGCGGCAAGCTGGGGTCTTCTGATAAACTTAACAGTGCAGAGGTTTTTAAATGTACTGCTGCAAACTGTGACCGTTTTTATCATCCACGTTGTGTTGCAAAATTACTTCCCATGGTGGTTAAGCATACCACAGAGGAATTTGAGAGAAACATTGCTGATGGGATTCCTTTTACTTGTCCCCTTCATTATTGTTGTGTCTGTAAAGGATTGGAAAATATGATGGATCCTGAGTTGCAGTTTGCTGTTTGTAGACGTTGTCCAAAGGCATATCATCGTAAATGTTTACCAACAGAAATTAATGCTGAAAACAATGATATACTAAGGGCATGGGAAGGTCTTCTACCAAAGAACCGCATTCTTATATATTGCTTAAATCATGAGATTGATCCTGAACTTGGGACTCCTGTAAGAGATCATATAAAATTCCCCAAAATGAAAGCTACTGCTAAAAAAAATGATACTACTATTGAGCAGAAAAAGCCTTCAACTAAAAAGATGGTTAAGTTGAAGAAAAATATTGACTCAGATAACTCACCAGGCAAAAGCACTTCTACAGGATCTAAACTGACTGCAAAACTGTCTTCTGACAAAGTTGGTACCAAGAAGTCATCTAATAAGAGAATTTCTAGTTCAAATATGTCGAAAAATCCAAAAAAGCCAAAACCAAAATCAAAAGAAGCATCAAGGTGTTTGACTGAAAATAAGATGTCAATTTTGAAGAAATTTGAAATTCTTGACACTGAACAAACATATAACCAGCTTACAGTTGGTAAAAATGATGGTTCGAAGCAAATTGAACGTGGCAATCAGATAAATAAGGTGAATACTAACTTCCCGTCTGTCGAGCCTAGTGGAGAGTTGAGTATTGAATTGCCTCCACTGGATACTGGTTTGGAAAAGAGTTTGTTGGCTTTATTTAAAGAAGCCAGTTCATCCATTACGTTGGAGACTGTCTTAGAAAAGCACACTCATAGTCACTCGTTGAGAAATGTTTTGGAGAAGACTACTACAACAGAGAAATTGGAAGATTCATCTGTGAGTGGGGGTAGCATTCAGGACGCCAAAGCTGTTTGTGACCCTGATGTTTTGAAACAGATATTTAAGTGGAAGATTGCAGATAAACTTCATTGGTATGTTCAGAATGGTGATACGATTGTGAACTTGAGCTGTGGTGCTGATAATTTTAGCATCCTTATGAAGAAAAGGCTTCAGGAGACTGGGAAGAGATGTTCCTACAGAAATTATGGTTTGCATCCAACAAAGAATGATTTTAGTTTTGAAAGGAAGAATTGGATGACTGTCCAACAAAACGAGTTACCCACAGGGTCACAGTTGATCATTGGTCTCAGCCCTCCCTTTGGTCATAACGCAGCATTGGCTAACAAGTTTATAGATAAGGCCCTTGAGTTTAAACCAAAGCTCCTAATTCTTACAGTAGCACCAGAGATACAGAGGCTTGATAAGAAACTATCACGGTATGATCTTATATGGGAGGATGAGAATTTTCTATCAGACAGGCCAATTAATCTACCTGGATCAGTCGATGCAAATGACAGACAAACGGATCAAAGGAATGTAAGGCCACCTGTACTTTCCCTCTGGAGCCGCTCTGACTGGACTACTAAACACAAGGTCATAGCCCAACAGAATGCTCATGAACTGTCAACCACAGAAAAATTGAAGTCTGACACATTAGCTGCTGCTGTTCATGCTCCCAGTGGAAATTGTGCTGACAATTCAAAGTTAACTGATGAGCAGCAAGAAGATCAAGTATCTGTAATTGATGATGTTCAGAACAGAAACTGCAGAAGCTCATGTAATAATGTTGAGGAACATAAGAAGGGCAAGCCTGAGAAGTCACGAAAGAAGAGAAAACGTGTTGACGAATCCAAACCAGCCAAAAGGCAGGCTGTAAATAAAATACCTAATGGAGTACCTGACCACACTGAACAACCCAATCCAATCAAGAAGACTGGTTCTTCGGATTCTGACCACACTGAACAACCCAATCCAACGAAGAAGACAGGTTCTTCGGATTCTGAACCTCGTACATTCATTAAAAGTGACAGTTCTGAACATAGTAGAGGATCCCAACCTGGATATGTTGGTCGATTGCATGGTTTTGCTGTTGTTCCTAACTATGTATATGCGAGCCAACATTCGTGTGGTTGGCTTGAAGAGTAG 3069 0.4037 MKRGRSSYSDCEEEYESEIQSISVSNYHLVDDEDNPVSFAVLPIQWNDSENSSACEEKVFLHGDADSGLLKTFMQVTAWRFDLSKARPEVFLLAKDGRWVKLQKPRKSFQEKVRTVLITLHFLHSVKGHDQKSVGSFWQDLSKDKELISYGSKPSKNDLSDHMLLIGEASKRDAVLAKSKLFLVVLEKLKSQKLLNEEVNDFELPGFPVVGTDSDMIDKSNEESEETDVLDVCALCDNGGNVTCCDGVCMRSFHATVAAGRENCCVSLGFTQKAVDEIDNFYCKNCEYRQHQCFACGKLGSSDKLNSAEVFKCTAANCDRFYHPRCVAKLLPMVVKHTTEEFERNIADGIPFTCPLHYCCVCKGLENMMDPELQFAVCRRCPKAYHRKCLPTEINAENNDILRAWEGLLPKNRILIYCLNHEIDPELGTPVRDHIKFPKMKATAKKNDTTIEQKKPSTKKMVKLKKNIDSDNSPGKSTSTGSKLTAKLSSDKVGTKKSSNKRISSSNMSKNPKKPKPKSKEASRCLTENKMSILKKFEILDTEQTYNQLTVGKNDGSKQIERGNQINKVNTNFPSVEPSGELSIELPPLDTGLEKSLLALFKEASSSITLETVLEKHTHSHSLRNVLEKTTTTEKLEDSSVSGGSIQDAKAVCDPDVLKQIFKWKIADKLHWYVQNGDTIVNLSCGADNFSILMKKRLQETGKRCSYRNYGLHPTKNDFSFERKNWMTVQQNELPTGSQLIIGLSPPFGHNAALANKFIDKALEFKPKLLILTVAPEIQRLDKKLSRYDLIWEDENFLSDRPINLPGSVDANDRQTDQRNVRPPVLSLWSRSDWTTKHKVIAQQNAHELSTTEKLKSDTLAAAVHAPSGNCADNSKLTDEQQEDQVSVIDDVQNRNCRSSCNNVEEHKKGKPEKSRKKRKRVDESKPAKRQAVNKIPNGVPDHTEQPNPIKKTGSSDSDHTEQPNPTKKTGSSDSEPRTFIKSDSSEHSRGSQPGYVGRLHGFAVVPNYVYASQHSCGWLEE 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02909 1022 Pfam Cytosine specific DNA methyltransferase replication foci domain 23 123 IPR022702 -
Viun8g02909 1022 MobiDBLite consensus disorder prediction 803 823 - -
Viun8g02909 1022 MobiDBLite consensus disorder prediction 471 512 - -
Viun8g02909 1022 MobiDBLite consensus disorder prediction 809 823 - -
Viun8g02909 1022 CDD PHD2_NSD 292 357 - -
Viun8g02909 1022 MobiDBLite consensus disorder prediction 438 470 - -
Viun8g02909 1022 MobiDBLite consensus disorder prediction 890 998 - -
Viun8g02909 1022 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 378 IPR013083 -
Viun8g02909 1022 MobiDBLite consensus disorder prediction 965 979 - -
Viun8g02909 1022 MobiDBLite consensus disorder prediction 438 526 - -
Viun8g02909 1022 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 229 289 IPR013083 -
Viun8g02909 1022 MobiDBLite consensus disorder prediction 901 930 - -
Viun8g02909 1022 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 16 857 - -
Viun8g02909 1022 SMART PHD_3 359 422 IPR001965 -
Viun8g02909 1022 SMART PHD_3 292 358 IPR001965 -
Viun8g02909 1022 SMART PHD_3 232 287 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02909 Viun-Chr8 36863416 36872828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02909 - - gmx:100806429 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02909 8 36863416 36872828 Viun8g02909 8 36863416 36872828 ECH
Viun6g00849 6 18242627 18259548 Viun8g02909 8 36863416 36872828 PCT