Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02900 ATGGCATCTTCTTCAAACTCATGGATGAAGGAATATAATGAAGCACTGAAACTTGCTGAGGATATCAGTGGTATGATTTCTGAGCAGAGTTCATTTCCTGCATCTGGACCAGAAATCCAGCGTCATTCATCTGCTATAAGGAGGAAGATTACTATATTGGGTACCCGGCTTGATAGCTTGCAATCGCTATTGTCCAAGCTTCCTGGAAAGCAGCCGCCCATATCTGACAAGGAGATGAATCGTCGCAAGGACATGCTCGCAAGTTTGAGATCAAAAGTTAATCAAATGGCTTCCACATTGAACATGTCAAACTTTTCAAATAGAGATAGTTTGCTTGGACCAGAAGGAAAACCAGATGCTATGGCCAGAACTGTTGGCCTGGACAACAATGGACTTGTTGGATTTCAACGGCAAATAATGAAAGAACAAGACGAGGGCCTTGAGCAATTGGAAGATACTATAGCAAGCACAAAACATATTGCTTTGGCAGTGAATGAAGAGCTGACTCTACACACCAGACTCATCGATGACTTGGACCAGCATGTAGATGTCACAGATTCTAGGCTTAGGCGGGTGCAGAAGAACTTAGCAATTTTAAACAAGCGAACCAGGGGTGGTTGTTCCTGCCTGTGCATGCTTTTATCAGTGATTGGTATAGTGTTTTTGGTTGTTGTCATTTGGCTATTGGTCAAATATTTGTGA 702 0.4259 MASSSNSWMKEYNEALKLAEDISGMISEQSSFPASGPEIQRHSSAIRRKITILGTRLDSLQSLLSKLPGKQPPISDKEMNRRKDMLASLRSKVNQMASTLNMSNFSNRDSLLGPEGKPDAMARTVGLDNNGLVGFQRQIMKEQDEGLEQLEDTIASTKHIALAVNEELTLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTRGGCSCLCMLLSVIGIVFLVVVIWLLVKYL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02900 233 PANTHER SYNTAXIN 34 221 IPR045242 -
Viun8g02900 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 199 IPR000727 -
Viun8g02900 233 CDD SNARE_Qc 140 197 - -
Viun8g02900 233 SMART tSNARE_6 132 199 IPR000727 -
Viun8g02900 233 SUPERFAMILY SNARE fusion complex 128 198 - -
Viun8g02900 233 Pfam SNARE domain 174 225 IPR000727 -
Viun8g02900 233 Gene3D - 139 201 - -
Viun8g02900 233 FunFam syntaxin-51 isoform X2 139 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02900 Viun-Chr8 36851546 36854188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02900 1 233 SNARE and Associated Proteins AT1G16240 72.222 1.11e-124 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02900 K08503 - gmx:100782666 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02900 8 36851546 36854188 Viun8g02900 8 36851546 36854188 ECH