Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02885 ATGATGAGTTTTCTTCCAATCTTGTTCATTAATTGTTTCTTTTGTCTTGGTAAAGCAACAGACTGTGGTGGAAATCATGTTACAGAAACCATCATTGTTGGTAAATATGGGCAAGCTGCATTCCGTACAATTCAAGCTGCCATTGATTCTGTAAAAACTAACAATGATCAATGGGTGAAGATTCATATAAAAGCAGGCTTATACATAGAAAGTGTTGTTATTCCCAAGCACAAGCCTTGCATAATTTTAAAAGGAGAAGGTAGCCGAAGAACAATCATTAGTCATTGGGACCACCATTCGATAAACAATAATGCTACATTCCTTTCTTTCGCACCCAATGTGATTGCAAGTGGCATTACTTTCAAGAACTCATATAATGTTGCCATTTATAAATCTAACGATTTGAGAAGAAAAATCGAACCAGCAAATGCGGCAAAAGTATATGGAGATAAATGTTTCTTCCATAAGTGTAGTTTTATAGGTTATCAAGACACTCTATTTGATCATTCGGGACGCCATTACTTCAAAGATTGTTACATTCAGGGCGATACGGATTTTGTATATGGTTACGGACGATCTTATTATAGGAATTGTTCGATCAAGGTTATGGGGAGAAATCCAAATTTACCAGGTTTTGTGACAGCTCAGGGAAGAAAGTCACGAGATGATCGTAGTGGTTTTGTATTCGAAGGAGGTTCCATTAAAGGGAATAGTAAAGTGAATTTGGGAAGAGCATGGAGACCCTATTCAAGAGTCATATTTCGTAATACATATTTTTCTGACATTGTAACCCCTCAGGGATGGGTTGCTTGGACAGCCGCGAACAATCCGAACACGACCACGTACGCTGAAGTTGATTGTAAGGGACCAGGAGCTAATACTTCGAAGCGTGTTCCGTGGATGAAGAAACTAAGTTCTTCAGACTTGAATGAGTTTTCGTTTGCATCTTTTATCAATAGTGATGGATGGGTTGACAACTTATCAACAATATCTTAA 996 0.3785 MMSFLPILFINCFFCLGKATDCGGNHVTETIIVGKYGQAAFRTIQAAIDSVKTNNDQWVKIHIKAGLYIESVVIPKHKPCIILKGEGSRRTIISHWDHHSINNNATFLSFAPNVIASGITFKNSYNVAIYKSNDLRRKIEPANAAKVYGDKCFFHKCSFIGYQDTLFDHSGRHYFKDCYIQGDTDFVYGYGRSYYRNCSIKVMGRNPNLPGFVTAQGRKSRDDRSGFVFEGGSIKGNSKVNLGRAWRPYSRVIFRNTYFSDIVTPQGWVAWTAANNPNTTTYAEVDCKGPGANTSKRVPWMKKLSSSDLNEFSFASFINSDGWVDNLSTIS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02885 331 Pfam Pectinesterase 31 320 IPR000070 GO:0030599|GO:0042545
Viun8g02885 331 Gene3D - 24 330 IPR012334 -
Viun8g02885 331 SUPERFAMILY Pectin lyase-like 28 327 IPR011050 -
Viun8g02885 331 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 26 325 - -
Viun8g02885 331 FunFam Pectinesterase 25 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02885 Viun-Chr8 36694258 36696409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02885 3 273 Carbohydrate Esterase AT2G19150 42.182 1.01e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02885 - - var:108336510 451.055