Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02884 ATGAATTTTCTTCCCATTTTGTTGATTAGTTGTTTCTCTTGTCTTGGTAAAGCCACAGACTGTGGTGGAAATAATGTTAGAGAAACTATCATTGTTGGTAAAGAAGGGAACGTAGCATTTAGTACAGTTCAAGAGGCCATTGATTCTGTAAAAATTAACAATGATCAATGGGTGAAGATTCACATAAAAGCAGGCTTGTACATAGAAAGTGTTGCTATTCCCGTAAACAAGCCTTGCATTCTTTTAGAAGGAGAGGGTAGCTCAATAACAATTATTACTCATTGGGATCACATGTCCTTAAACAACAATGCTACATTCACTTCTTCACCACCCAATGTCATTGCAAGTGGCCTTACTTTCAAGGTAAACATATAA 375 0.3627 MNFLPILLISCFSCLGKATDCGGNNVRETIIVGKEGNVAFSTVQEAIDSVKINNDQWVKIHIKAGLYIESVAIPVNKPCILLEGEGSSITIITHWDHMSLNNNATFTSSPPNVIASGLTFKVNI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02884 124 Pfam Pectinesterase 30 117 IPR000070 GO:0030599|GO:0042545
Viun8g02884 124 Gene3D - 23 124 IPR012334 -
Viun8g02884 124 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 24 121 - -
Viun8g02884 124 SUPERFAMILY Pectin lyase-like 27 121 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02884 Viun-Chr8 36691311 36691797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02884 7 121 Carbohydrate Esterase AT2G19150 40.870 9.68e-23 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02884 - - vun:114195178 253.447