Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02883 ATGTCAAACAGTAGCTGTGTGATCAATGCTGTGGGGAGATTTCCAAATCTACCAGGTTTTGTGACAGCTCAGGGAAGAAGTTCAGCAGACGATCCTAGTGGTTTTGTATTCGAAGGATGTTCCATTAAAGGGAATGGTGAAGTAAATTTAGGAAGGGCATGGGAACCCTATTCAAGAGTCATATTTAAAAAAACATATTTTTCTGAAATAACTCCTCAAGGATGGGTTGCTTGGAGAGCTGCTAACGATCCGAGCACGACCACTTATGCTGAAGTTGATTGTAAGGGACCAGGAGCTGATACTTCCAAGCGTGTTCCATGGATGAAGAATCTAAGTTCTTCAGAATTGTATGAGTTTTCGTTTGCGTCTTTTATCAATAGTGATCGATGGGTTGACAAATTACCAATAATATCTTAA 417 0.4005 MSNSSCVINAVGRFPNLPGFVTAQGRSSADDPSGFVFEGCSIKGNGEVNLGRAWEPYSRVIFKKTYFSEITPQGWVAWRAANDPSTTTYAEVDCKGPGADTSKRVPWMKNLSSSELYEFSFASFINSDRWVDKLPIIS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02883 138 Pfam Pectinesterase 6 127 IPR000070 GO:0030599|GO:0042545
Viun8g02883 138 SUPERFAMILY Pectin lyase-like 4 134 IPR011050 -
Viun8g02883 138 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 132 - -
Viun8g02883 138 Gene3D - 3 137 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02883 Viun-Chr8 36684978 36685809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02883 19 131 Carbohydrate Esterase AT1G05310 46.491 2.72e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02883 - - vun:114195176 290.812