Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02882 ATGAGTCTTCTTCCAATCTTGTTGATTAGTTGTTTCTTTTGTGTTGGTAAAGCCACAGACTGTGGTGGAAATCATGTTAAACAAACCATCATTGTGGGTAAAGAAGGGGACGCAGCATTTAGTAGAATTCAAGAGGCCATTAATTCTGTCAGAAATAACAATGATCAATGGGTGAAGATTCATATCAAAGCAGGCTTGTACATAGAAAGTATTGTTATTCCGAAAAACAAGCCTTGCATTATTTTAGAAGGAGAGGGTAGCGCAAGAACAACCATTGATCACAAGGACCACCAGTCGATAAACAAGAATGCTACATTTCTTTCTTTCGCACCCAATGTGATTGCAAGTGGCATTACTTTCAAGAACTCATATAATGTGGCCACCGATAAACCTTGCGATTTGGGAAGCAGAATCGAACCAGCAAATGCGGCAAAACTATATGGAGATAAATATTTCATGCATAAGTGTAGTTTTGTAGGTTATCAAGACACTTTATATGATATTCAGGGACGTCATGTGTTTAGAGATTGTTACATTCAGGGTGAAGTGGACTTTATATATGGTTACTCACAATCCTACTATCAGAACTGTTTGATCAATGCTGTCGGGAGAAATCGAAATTTACCAGGTTTTGTGACAGCTCAGGGAAGAGAATCAGCAGATGATCGTAGTGGTTTTGTATTCGAAGGAGGTTTGATTAAAGGGAATGGTAAAGTGAATTTAGGAAGAGCATGGAAACCCTATTCAAGAGTCATATTTCGTAATACATATTTTTCTGACATTGTAACTCCTCAAGGTTGGGTTGCTTGGTCAGCCGCTAATAATCCGAGCACGACCACTTATGCTGAAGTTGATTGTAAGGGACCAGGAGCTGATACTTCCAAGCGTGTTCCGTGGATGAAGAAACTACGTTCTTCAGACTTGAATGAGTTATCTTTTGAGTCTTTTATCAATAGCGACGGATGGTTTGACAACTTACCAACAGTGTCTTAA 993 0.3897 MSLLPILLISCFFCVGKATDCGGNHVKQTIIVGKEGDAAFSRIQEAINSVRNNNDQWVKIHIKAGLYIESIVIPKNKPCIILEGEGSARTTIDHKDHQSINKNATFLSFAPNVIASGITFKNSYNVATDKPCDLGSRIEPANAAKLYGDKYFMHKCSFVGYQDTLYDIQGRHVFRDCYIQGEVDFIYGYSQSYYQNCLINAVGRNRNLPGFVTAQGRESADDRSGFVFEGGLIKGNGKVNLGRAWKPYSRVIFRNTYFSDIVTPQGWVAWSAANNPSTTTYAEVDCKGPGADTSKRVPWMKKLRSSDLNELSFESFINSDGWFDNLPTVS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02882 330 FunFam Pectinesterase 24 327 - -
Viun8g02882 330 Pfam Pectinesterase 30 319 IPR000070 GO:0030599|GO:0042545
Viun8g02882 330 SUPERFAMILY Pectin lyase-like 26 326 IPR011050 -
Viun8g02882 330 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 324 - -
Viun8g02882 330 Gene3D - 23 328 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02882 Viun-Chr8 36679954 36681661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02882 2 272 Carbohydrate Esterase AT2G19150 41.818 7.42e-69 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02882 - - var:108336510 474.937