Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02881 ATGGAATCGTTCTCTAGAATGATGAGTTTTCTTCCAATCTTGTTGATTAGTTGTTTCTTTTGTGTTGGTAAAGCCACAGACTGTGGTGGAAATCATGTTACAGAAACTATCATTGTTGGTAAAGAAGGCGACGCAACATTTAGTACAATTCAAGAAGCCATTGATTCTGTAAAAATTAACAATGACCAATGGATCAAGATTCATATTCAAGCAGGCTTATACATAGAAAGGGTTACTATTCCGAGAGAAAAATCATGTATAATTTTAGAAGGAGAGGGTAATTCGACAACAACCATAAGTTACGCAGACCACAGATCAATAAACCATAACGCTACGTTTACTTCTTTAGCATCCAATGTGGTTGCAAGTGGCATTACTTTCAAGAACTCATATAATTTGGTGAATAAAAGATACAAATCTTACAACGTGGGAAGCAAAATCGAACAAGCAAATGCAGCAAGACTGCATGGAGATAAATATTTCTTCTATAATTGTAGTTTTTTAGGTTATCAAGACACTCTGTATGATCATTGGGGACGTCATTACTTCAAAGATTGTTACATTGAAGGTGAAATCGACTTTATATATGGTAGTGGGCAATCTTTCTATGAGAACTGTTGGATAAATGTTATTGGAAGATTTCATTCAGCAGGGTATGTGACAGCTCAGGGACGAACTTCACCAGATGATCCAGATGGTTTTGTTTTTGAAGGAGGTTCCCTTATAGGGAATGGTAAAGTGAATTTAGGAAGAGCATGGAAAGCCTATTCAAGAGTCATATTTCATAAAACATATTTTTCTGATATTGTAACTCCTCAAGGATGGAATGCTTGGCATTATGCAGGCAATGAGAGTGGAATCACTTATGCTGAAGTTGATTGTGAAGGAGCAGGAGCTGACACCTCGAAGCGTGTTCCATGGATGAAAACCCTAAATGCTTCAGAAATGGAAGAATTTTCTTTAGCATCTTTTATTAATAAGGATGGATGGGTTGACAACTTACCAATACAATCCTCCTAA 1020 0.3647 MESFSRMMSFLPILLISCFFCVGKATDCGGNHVTETIIVGKEGDATFSTIQEAIDSVKINNDQWIKIHIQAGLYIERVTIPREKSCIILEGEGNSTTTISYADHRSINHNATFTSLASNVVASGITFKNSYNLVNKRYKSYNVGSKIEQANAARLHGDKYFFYNCSFLGYQDTLYDHWGRHYFKDCYIEGEIDFIYGSGQSFYENCWINVIGRFHSAGYVTAQGRTSPDDPDGFVFEGGSLIGNGKVNLGRAWKAYSRVIFHKTYFSDIVTPQGWNAWHYAGNESGITYAEVDCEGAGADTSKRVPWMKTLNASEMEEFSLASFINKDGWVDNLPIQSS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02881 339 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Viun8g02881 339 FunFam Pectinesterase 31 335 - -
Viun8g02881 339 Pfam Pectinesterase 37 327 IPR000070 GO:0030599|GO:0042545
Viun8g02881 339 SUPERFAMILY Pectin lyase-like 34 335 IPR011050 -
Viun8g02881 339 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 31 332 - -
Viun8g02881 339 Gene3D - 30 339 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02881 Viun-Chr8 36672257 36675553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02881 9 284 Carbohydrate Esterase AT2G19150 45.196 1.33e-79 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02881 - - var:108336510 574.318