Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02865 ATGGAACCCTCTTCCAATCATGACATTGCTAAGCCTTCTTCACATCCCTTCATGTCCTTCAGAGGGACACCACTCCTCATGGATGCCCTCGATTTCTTCCCTCAGAAGAGTAAAGAGACTGAAGATGATGACGATGATGATGATGCCGATGACATTGATCATCATCATCAAAATCTCGACTTTCATGTAGATACCAGTTTGGATCTCCTTACCAAGAACACCAGTGGCAACAGATCAATTGAAGAAAATGATGCATTGGAAACTATGGATGAAAAGAGGTTTGTAGCTTTGGTAACTGAACTGCACCAAGTGAATGCTGAAAATCAAAGATTAAGAGAGTTGATCGATCAGATGAACAATAACAGCAATGCCGTACGCATGCAGCTTATCAAGATAACGCAGAAGCAGCATAACCAAGGGAACAATGGAGTGAGTGGAGAGAAAGAAGAGATGGTTGTTCCAAGGTCATTTTTAGACATGGGTGTGGCTGAAAAGGATGAGGCTTCGCAGCAAGTGTCTGAGGAAAAACTGAGAGAAAGCAAAAGCGTGGTTGATTTGATTCATCGGTGTAAGGGTAGTGAGAAAGACATTGAAGATAAGTTGGATTGTGTGAGGGAAAGCTCAAAAGCTAGAATGGAAGGTGACCAAGAACTTTCTAACAAAGTTCCTAAATTGGATCAGAGTTCAGAAACCTTGTCAATGATCAAGAAAGCCCGTGTGTCAGTTCGAGCAAGATCAGACTCCACAATGATTGCAGATGGATGCCAATGGCGAAAGTACGGGCAGAAGATGGCAAAAGGGAATCCATGTCCAAGGGCCTATTATCGTTGCACAATGAGTACTGGTTGCCCAGTGCGTAAACAAGTGCAAAGGTGTGCAGAAGATCGAAGTGTGTTGATCACTACATATGAAGGGCAACACAACCATCCACTTCCTCCCACAGCTCAGGCAATGGCCTCAACCACTTCTGCAGCTGCTTCAATGCTTCTTTCTGGATCAATGCCAAGCTCAGATGGCCTAATCAATCCAACCATTTTGGAAAGTGCTTCTCTTCCATGCTCTCAAAACATGGCTACTCTCTCTGCCTCAGCCCCATTTCCCACCATCACCCTTGATCTCACTCAAAATGCTACCAATTCCTCACAGCACCAAAGGGAGCCACAGAACCAACTCAGCCTCCTCTCTCCCCTTTTGGCTCAGAAGTTCATGTCAGTTCCAAAATTATTTGGACACTCACTTTGTGATCAAACTAAGCTTGCTGGGTTACATGAGTCTCAGGGAATGGACACTGCAGCTCCATCATTTGCTAACTCACTCAATGCAGCAACTGCTGCTATCACTGCAGACCCCAATTTCACTGCAGCACTTGTCGCAGCCATAACATCTGTCATGGGGAGTTCGCATTCAAACACCGGTGGCACCAGTAATACAACTGGGGATGATCAGTGCAATAATAATGCGTGA 1464 0.4495 MEPSSNHDIAKPSSHPFMSFRGTPLLMDALDFFPQKSKETEDDDDDDDADDIDHHHQNLDFHVDTSLDLLTKNTSGNRSIEENDALETMDEKRFVALVTELHQVNAENQRLRELIDQMNNNSNAVRMQLIKITQKQHNQGNNGVSGEKEEMVVPRSFLDMGVAEKDEASQQVSEEKLRESKSVVDLIHRCKGSEKDIEDKLDCVRESSKARMEGDQELSNKVPKLDQSSETLSMIKKARVSVRARSDSTMIADGCQWRKYGQKMAKGNPCPRAYYRCTMSTGCPVRKQVQRCAEDRSVLITTYEGQHNHPLPPTAQAMASTTSAAASMLLSGSMPSSDGLINPTILESASLPCSQNMATLSASAPFPTITLDLTQNATNSSQHQREPQNQLSLLSPLLAQKFMSVPKLFGHSLCDQTKLAGLHESQGMDTAAPSFANSLNAATAAITADPNFTAALVAAITSVMGSSHSNTGGTSNTTGDDQCNNNA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02865 487 MobiDBLite consensus disorder prediction 1 20 - -
Viun8g02865 487 ProSiteProfiles WRKY domain profile. 246 312 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02865 487 FunFam probable WRKY transcription factor 31 236 313 - -
Viun8g02865 487 MobiDBLite consensus disorder prediction 466 487 - -
Viun8g02865 487 Gene3D WRKY domain 236 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02865 487 SUPERFAMILY WRKY DNA-binding domain 244 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02865 487 SMART WRKY_cls 251 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02865 487 Coils Coil 101 128 - -
Viun8g02865 487 Pfam WRKY DNA -binding domain 253 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02865 487 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 63 475 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02865 Viun-Chr8 36603462 36606121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02865 30 473 WRKY Transcription Factor Family AT1G62300 45.223 1.32e-106 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun8g02865 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02865 - - vum:124848283 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00606 6 16026681 16029737 Viun8g02865 8 36603462 36606121 PCT