Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02840 ATGGCGAATTTGCCACAATCAATCTCAATGAGTGGTGCGTCCTTTGGAGCTTCTTCTGTCTCTGCAACGAAGGATCGCAGAATGGCGTCTGTGGAACATCTCGTCCTCGAACTCAGCAACCCTGATCTCCGAGAAAACGCACTCCATGAACTCTCCAAGAAGAGAGAGTTATTTCAGGATCTTGCTCCATTACTGTGGAATTCTTTTGGTACTATGGCAGCGCTTTTGCAGGAAATAGTTTCAATATACCCTGTTATTTCACCGCCAAACCTTACTCCAGCACAATCAAACCGAGTCTGCAATGCTCTCGCCCTTCTTCAGTGTGTGGCGTCTCACCTGGATACAAGGATGCAATTCCTCAATGCTCATATACCTCTTTATCTGTATCCCTTCCTTAATACAACAAGTAAGTCCCGGCCATTTGAGTATTTGAGGCTTACCAGTCTAGGAGTCATTGGTGCCTTGGTAAAGGTTGATGATACAGAAGTTATAAGTTTTCTTCTTTCAACAGAGATTATTCCGCTGTGCTTGCGCAGTATGGAAATGGGAAGTGAATTGTCAAAAACGGTTGCAACCTTTATAGTCCAAAAAATTCTGTTGGACGAAATTGGTTTAAAATATATTTGCACTACAGCAGAGCGGTTTTATGCAGTAGGTCGAGTTTTGGGAAACATGGTGGCAACTCTTGTTGAGCAACCGTCATGCCGTCTTTTGAAGCATATTATTCGTTGCTATCTTCGTCTGTCAGATAACCAGAGTGCTTGCGAGGCTTTAAGAACCTGTCTCCCAGACATGTTAAGAGACGCTACATTCAGTAGTTGCCTTCGTGAGGACCCAACAGCAAGGCGGTGGTTACAGCAGTTGCTTCACAACATCGGAGTCAATCGAGTTCCTGCACTTCAAGGTGGAGGAGGATTTGATCATATGATGGTGTCGTGA 939 0.4452 MANLPQSISMSGASFGASSVSATKDRRMASVEHLVLELSNPDLRENALHELSKKRELFQDLAPLLWNSFGTMAALLQEIVSIYPVISPPNLTPAQSNRVCNALALLQCVASHLDTRMQFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRSMEMGSELSKTVATFIVQKILLDEIGLKYICTTAERFYAVGRVLGNMVATLVEQPSCRLLKHIIRCYLRLSDNQSACEALRTCLPDMLRDATFSSCLREDPTARRWLQQLLHNIGVNRVPALQGGGGFDHMMVS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02840 312 FunFam Cell differentiation protein RCD1 24 295 - -
Viun8g02840 312 SUPERFAMILY ARM repeat 36 273 IPR016024 -
Viun8g02840 312 Pfam Cell differentiation family, Rcd1-like 34 292 - -
Viun8g02840 312 Gene3D - 23 293 IPR011989 -
Viun8g02840 312 PANTHER UNCHARACTERIZED 24 295 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02840 Viun-Chr8 36550178 36555899 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Viun8g02840 Rcd1 2e-128 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02840 K12606 - gmx:100801266 570.081