Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02814 ATGATGATGGCGAGCGATCTAATCTTTCAAAGGAAGTTCTTACTAGCTGTGAAAGTATTGATTGGCAGAAAGGTAGATGAATTGGACAAAGCAATTTCTGTGGCCTCTAGAGATCCTTCTTTGTATGGCATTGACGAAGTGGAGCTTCAGAACCGGAGGAGGTGGACCAGTGATGCTCGTAGCCAGGTGAGCACAGCAAAGAAAGCAGTGGAAGCAGGAACACGCTCAAATATAACAAACAATGCCAGTCTAAATGGGATGCGCAGGGAATTAATGAGGCTTACTAATTCTCATCAATCTGGGTCTGACCCATATTCTACCCAGGATAATGACGATTTCATAGAATCAGAATCGGATAGGCAGATGCTTCTTATAAAGAGACAGGATGAGGAGTTGGACGAACTTAGTATAAGTGTACAAAGAATTGGAGATGTTGGACTTACTATACATGAAGAGCTCGTGGCACAGGAGAAGATTGTTGATGAACTGGGTAATGAGATGGACAGTACATCTAATCGTCTAGATTTTGTCCAAAAAAAAGTAGCAATGGTCATGAAGAAGGCTAGCGCAAAGGGCCAGATCATGATGATCCTGGGTTTGCTGGCTCTGTTCATTTTCCTCTTTATCTTGGTATTCTTCACCTAG 645 0.4264 MMMASDLIFQRKFLLAVKVLIGRKVDELDKAISVASRDPSLYGIDEVELQNRRRWTSDARSQVSTAKKAVEAGTRSNITNNASLNGMRRELMRLTNSHQSGSDPYSTQDNDDFIESESDRQMLLIKRQDEELDELSISVQRIGDVGLTIHEELVAQEKIVDELGNEMDSTSNRLDFVQKKVAMVMKKASAKGQIMMILGLLALFIFLFILVFFT 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02814 214 CDD SNARE_Qc 125 182 - -
Viun8g02814 214 SMART tSNARE_6 117 184 IPR000727 -
Viun8g02814 214 SUPERFAMILY SNARE fusion complex 120 184 - -
Viun8g02814 214 Coils Coil 160 180 - -
Viun8g02814 214 Pfam Syntaxin 6, N-terminal 23 67 IPR015260 GO:0016020|GO:0048193
Viun8g02814 214 Gene3D - 129 193 - -
Viun8g02814 214 SUPERFAMILY t-snare proteins 23 70 IPR010989 GO:0016020|GO:0016192
Viun8g02814 214 PANTHER SYNTAXIN 25 206 IPR045242 -
Viun8g02814 214 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 122 184 IPR000727 -
Viun8g02814 214 FunFam syntaxin-61 isoform X1 125 186 - -
Viun8g02814 214 Gene3D - 12 73 - -
Viun8g02814 214 Pfam SNARE domain 159 210 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02814 Viun-Chr8 36425996 36429082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02814 19 214 SNARE and Associated Proteins AT1G28490 67.513 1.96e-88 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02814 K08500 - gmx:100793612 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00790 6 17671688 17675758 Viun8g02814 8 36425996 36429082 PCT