Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02804 ATGAGCGGAGTTGGGATTGATATTGGAAATGAGAATTGTGTGATTGCTGCAGTGAAGCAAGGAGGGGTTGATGTTTTATTGAATGATGAATCCGAACGTGAAACCCCTGCTGTGGTTTGTTTTGGAGAGAAGCAAAGGTTTGTAGGGTCAGCTGGTGCTGCTTCTGCCATGATGCACCCCAAGTCTGCAATATCTCAATTGAAGAGATTAATAGGTAGGAGATTTGGGGACCCTGATGTCCAAAACGAGTTGAAAATGCTCTCTGTAGAAAGCTCGGAAAGTGCAGATGGTGGCATTCTGATACACTTGGAATACTTGAAGGAGAGTCATGCTTTTACCCCGGTTCAAATAATAGCAATGCTCTTTGCGCACTTGAAGTCCGTAGCAGAAAAAAATTTAGGGACCACCGTTTCTGACTGTGTTATTGGGGTTCCATCGTACTTCACCATCTTGCAGAGACAAGCTTATCTCCACGCAGCAGCAATTGTTGGATTGAAGCCTTTGAGGTTGATCCATGATTGCACTGCAACTGCTCTTAGTTATGGAGTTTACAAAACAGATTTTGCTAGTGAAGCTCCTGTTTATGTTGCATTTGTTGACATAGGTCATTGTGATACTCAGGTCTGTATTGCAGCATTTCAGGATGGTGAAATGAAGATACTCTCACATGCTTATGACATGAGCTTAGGGGGGAGAGACTTTGATGAGGTTCTGTTTAGTCATTTTGCTGCAAAATTTAAAGAACAGTACGACATTGAAGTGTATTCTAATGACAGGGCATGTAGGAGGCTGCGTGTAGCATGTGAGAAGTTGAAGAAGGTTTTGAGTGCAAATCTAGAGGCAGCTCTGAGCGTTGAGTGTTTGATGGATGAAAAAGATGTTAAGGGCTACATCAAGAGGGAAGAATTTGAGAATCTGGCATCACGACTATTGGAGAGAATTTCTGTTCCTTGCAAGAAAGCATTGGCTAATGCAGACTTGACAGTAGAAGAGATTAGTTCCGTTGAGTTAGTTGGTTCAGGTTCACGGATTCCAGCTATAACTAGAATACTAACTTCTCTATTTAAGAAAGAGCTCAGCCGCAGACTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTCCAGTGTGCAATGCTGAGTCCTGTTTTCCGTGTCAAAGAATATGAGGTCCACGATTCTATTCCTTTTTCCATTGGACTTTCATCTGATGGAAAGGCAATTCCTGCAGGATTGGATAGTGTACTCTTCACGAAAGGCCAACCTATTCCAAGTGTTAAAATTCTGACGTTTGAGTATTGTGATTTGCTCCATTTGGAAGCATTCTATGCAAATCCAGATGAATTACCACTCGAGGCATATCCTAAAATTTGTTGCTTCACAATTGGTCCTTTCCACGGATCCCATGCAAGTAAGGCAAGAATTGAAGTTCAAGTTCATCTAAATTTGCATGGCATTATCGATATTGAATCATTGGTTGAAGATCATGTGGATGATTCAGGTGCAGCAGATGATTCTTATTCAAATTCTGAAGCAATCAATATTTCACTTGTTTCTGAGACAATTGATAATGCCTCAGATGATAGTATCAATAAAAATTGTGAAGCTTCTCATCATTCTGCTGATGGTACAAGAAATGATAAAGCTAACCGAAGGCTTCATGTACCAGTGAGTGAAAACATTTATGGTGCAATGACCAAGGCCGAGATATCAGAAGCTCTAGAAAAAGAACTCCAGTTAGCCGATCAGGACAAAGCTACTGAGCTAATCAAAGACAACAAGAATCAGTTGGAGTCTTATATTTATGAAACAAGGAGTAAGATCTTTAGCACATACCGGAGCTTTTCGAGTGAACATGAGAAGAAGGACGTATCTAAGAGCCTGAAAGAGACTGAGGAATGGCTCTATGATGATGGTGGTGATGAAACCGTAGATGCTTATTCTGCAAAACTAAAAGATCTAAAAGAGCTGGTGGATCCAATTGAGTATCGATATAAAGACAGAGAAGCAAGACCACAAGCTACAAGAGACTTGTTAAGCTGCATTGTAGAATATCGATTGTCAGCAGATTCTCTTGCACCCCAAGATAAAGAAGTGGTCATAAATGAGTGCAATAAAGCAGAGCAGTGGCTAAGAGAGATGAGGCAGCAACAAGATTATTACCCTAAAAACTCTGATCCAGTATTATTATCAATTGATATACAGAGCAAGACAGAGGAGTTAAACTCAGTATGCCAAAAGATATTGAATTTGAATTCCAACGGTTCTCCAGTTCCAAGAGACGAGGGTAAAGACGACGAACAGAATACTCCATGA 2316 0.4085 MSGVGIDIGNENCVIAAVKQGGVDVLLNDESERETPAVVCFGEKQRFVGSAGAASAMMHPKSAISQLKRLIGRRFGDPDVQNELKMLSVESSESADGGILIHLEYLKESHAFTPVQIIAMLFAHLKSVAEKNLGTTVSDCVIGVPSYFTILQRQAYLHAAAIVGLKPLRLIHDCTATALSYGVYKTDFASEAPVYVAFVDIGHCDTQVCIAAFQDGEMKILSHAYDMSLGGRDFDEVLFSHFAAKFKEQYDIEVYSNDRACRRLRVACEKLKKVLSANLEAALSVECLMDEKDVKGYIKREEFENLASRLLERISVPCKKALANADLTVEEISSVELVGSGSRIPAITRILTSLFKKELSRRLNASECVARGCALQCAMLSPVFRVKEYEVHDSIPFSIGLSSDGKAIPAGLDSVLFTKGQPIPSVKILTFEYCDLLHLEAFYANPDELPLEAYPKICCFTIGPFHGSHASKARIEVQVHLNLHGIIDIESLVEDHVDDSGAADDSYSNSEAINISLVSETIDNASDDSINKNCEASHHSADGTRNDKANRRLHVPVSENIYGAMTKAEISEALEKELQLADQDKATELIKDNKNQLESYIYETRSKIFSTYRSFSSEHEKKDVSKSLKETEEWLYDDGGDETVDAYSAKLKDLKELVDPIEYRYKDREARPQATRDLLSCIVEYRLSADSLAPQDKEVVINECNKAEQWLREMRQQQDYYPKNSDPVLLSIDIQSKTEELNSVCQKILNLNSNGSPVPRDEGKDDEQNTP 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02804 771 PRINTS 70kDa heat shock protein signature 140 160 - -
Viun8g02804 771 PRINTS 70kDa heat shock protein signature 30 42 - -
Viun8g02804 771 PRINTS 70kDa heat shock protein signature 472 488 - -
Viun8g02804 771 PRINTS 70kDa heat shock protein signature 2 15 - -
Viun8g02804 771 PRINTS 70kDa heat shock protein signature 332 348 - -
Viun8g02804 771 PRINTS 70kDa heat shock protein signature 388 407 - -
Viun8g02804 771 PRINTS 70kDa heat shock protein signature 363 383 - -
Viun8g02804 771 FunFam Heat shock 70 kDa protein 4 230 313 - -
Viun8g02804 771 SUPERFAMILY Actin-like ATPase domain 192 381 IPR043129 -
Viun8g02804 771 Gene3D - 565 677 IPR029048 -
Viun8g02804 771 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 516 IPR029047 -
Viun8g02804 771 MobiDBLite consensus disorder prediction 528 549 - -
Viun8g02804 771 MobiDBLite consensus disorder prediction 532 549 - -
Viun8g02804 771 FunFam Heat shock 70 kDa protein 4 107 194 - -
Viun8g02804 771 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 598 IPR029047 -
Viun8g02804 771 Gene3D - 186 360 - -
Viun8g02804 771 SUPERFAMILY Actin-like ATPase domain 3 185 IPR043129 -
Viun8g02804 771 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 567 664 IPR029048 -
Viun8g02804 771 FunFam Heat shock 70 kDa protein 4 1 73 - -
Viun8g02804 771 Gene3D - 38 113 - -
Viun8g02804 771 FunFam Heat shock 70 kDa protein 4 565 675 - -
Viun8g02804 771 PANTHER HSC70CB, ISOFORM G-RELATED 1 762 - -
Viun8g02804 771 CDD HSPA4_like_NDB 2 381 - -
Viun8g02804 771 Pfam Hsp70 protein 4 665 IPR013126 GO:0005524|GO:0140662
Viun8g02804 771 MobiDBLite consensus disorder prediction 752 771 - -
Viun8g02804 771 Gene3D Actin; Chain A, domain 4 230 313 - -
Viun8g02804 771 Gene3D - 5 374 - -
Viun8g02804 771 FunFam Heat shock 70 kDa protein 4 38 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02804 Viun-Chr8 36402975 36407736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02804 4 435 Calmodulin-binding Proteins AT1G16030 33.638 2.57e-73 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02804 K09489 - gmx:100795914 1215.68