Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02794 ATGGAAGGTGTTATTGTGAGAAGAGTTATTCCTTCGGATAACAGCTGTCTCTTCAATGCAGTTGGATATGTAATGGATCATGACAAGAAGAAAGCCCCTGAGTTGCGACAGGTTATAGCTGCAACAGTAGGAAGTGATCCACAGAAATATTGTGAAGCATTTCTTGGGAAGCCAAATGCAGAATATTGTAACTGGATTCTTGACTCAGAGAAGTGGGGAGGTGCAATCGAACTTGCAATATTAGCAGATTATTATGGACGTGAAATTGCAGCATATGATATCCAGACAACTCGATGTGATTTGTATGGTCAGGAAAGGAACTACTCTGAAAGAGTGATGCTGATTTATGACGGTCTTCACTATGATGCATTAGTGATGTCTCCCGTTGAGGATGCTCCTGAAGAGTTTGATCAGACCATATTTGCGGTTCAGCCGAACAGAAGCATTGGACCTGTGGAGAGGCTTGCTCTAAATTTTGTGAAGGACCAGCAGAGGAAACGGAGTTACACTGACACTTCCAAGTTCACTCTGCGCTGTGGGGTATGCCAAATTGGAGTAGTTGGCCAGAAGGAGGCAATGGAGCATGCACAGGCCACTGGTCATGTTAACTTTCAAGAGTATAGATGA 627 0.437 MEGVIVRRVIPSDNSCLFNAVGYVMDHDKKKAPELRQVIAATVGSDPQKYCEAFLGKPNAEYCNWILDSEKWGGAIELAILADYYGREIAAYDIQTTRCDLYGQERNYSERVMLIYDGLHYDALVMSPVEDAPEEFDQTIFAVQPNRSIGPVERLALNFVKDQQRKRSYTDTSKFTLRCGVCQIGVVGQKEAMEHAQATGHVNFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02794 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 - -
Viun8g02794 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
Viun8g02794 208 Gene3D - 1 173 - -
Viun8g02794 208 SUPERFAMILY Cysteine proteinases 7 125 IPR038765 -
Viun8g02794 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Viun8g02794 208 Pfam OTU-like cysteine protease 12 102 IPR003323 -
Viun8g02794 208 CDD OTU_plant_OTU1_2-like 3 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02794 Viun-Chr8 36369994 36374714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02794 1 208 C2H2 Transcription Factor Family AT1G50670 80.288 7.49e-128 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02794 K13719 - gmx:100499809 405.986