Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02792 ATGTTCAGGAGAAGGACGGTGCCATGGCATCTGAATCCAAACGGTGGCTGGTGGTTGTCTACAATCTGTGTCATGGAAGGTGTTATTGTGAGAAGAGTTATTCCTTCGGATAACAGCTGTCTCTTCAATGCAGTTGGATATGTAATGGATCATGACAAGAAGAAAGCCCCTGAGTTGCGACAGGTTATAGCTGCAACAGTAGGAAGTGATCCACAGAAATATTGTGAAGCATTTCTTGGGAAGCCAAATGCAGAATATTGTAACTGGATTCTTGACTCAGAGAAGTGGGGAGGTGCAATCGAACTTGCAATATTAGCAGATTATTATGGACGTGAAATTGCAGCATATGATATCCAGACAACTCGATGTGATTTGTATGGTCAGGAAAGGAACTACTCTGAAAGAGTGATGCTGATTTATGACGGTCTTCACTATGATGCATTAGTGATGTCTCCCGTTGAGGATGCTCCTGAAGAGTTTGATCAGACCATATTTGCGGTTCAGCCGAACAGAAGCATTGGACCTGTGGAGAGGCTTGCTCTAAATTTTGTGAAGGACCAGCAGAGGAAACGGAGTTACACTGACACTTCCAAGTTCACTCTGCGCTGTGGGGTATGCCAAATTGGAGTAGTTGGCCAGAAGGAGGCAATGGAGCATGCACAGGCCACTGGTCATGTTAACTTTCAAGAGTATAGATGA 699 0.4449 MFRRRTVPWHLNPNGGWWLSTICVMEGVIVRRVIPSDNSCLFNAVGYVMDHDKKKAPELRQVIAATVGSDPQKYCEAFLGKPNAEYCNWILDSEKWGGAIELAILADYYGREIAAYDIQTTRCDLYGQERNYSERVMLIYDGLHYDALVMSPVEDAPEEFDQTIFAVQPNRSIGPVERLALNFVKDQQRKRSYTDTSKFTLRCGVCQIGVVGQKEAMEHAQATGHVNFQEYR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02792 232 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 29 230 - -
Viun8g02792 232 CDD OTU_plant_OTU1_2-like 27 190 - -
Viun8g02792 232 Gene3D - 19 197 - -
Viun8g02792 232 ProSiteProfiles OTU domain profile. 29 151 IPR003323 -
Viun8g02792 232 FunFam ubiquitin thioesterase OTU1 25 197 - -
Viun8g02792 232 SUPERFAMILY Cysteine proteinases 29 149 IPR038765 -
Viun8g02792 232 Pfam OTU-like cysteine protease 36 126 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02792 Viun-Chr8 36369720 36374714 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02792 25 232 C2H2 Transcription Factor Family AT1G50670 80.288 3.93e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02792 K13719 - gmx:100499809 405.986