Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02782 ATGAATCTTCTTTGGTTGGGTTTTCTCTTCTTCATCCCAATCCTTCTTCTGTTCAGAAGAGAAAGAAACCCTTCTAAAAGGGTTCCTCCTGGTTCACTTGGAATACCTATTATTGGCCAAAGTCTCGGCCTTCTTCGAGCTATGCGTGCCAACACTGCAGAAAAATGGGTTCAAGAAAGGATCAACAAGTATGGTCCCATTTCAAAGCTAAGCCTATTCGGAAAACCAACAGTGTTAATCTATGGACAAGCTGCAAATAAGTTTGTATTCTCTAGTGGCGGCAACGCAATTGCTAACCAGCAAACACAATCGATAAAAGCGATCCTAGGTGACCGAAACTTGCTGGAACTGAGTGGTGAAGATCACAGCCGAGTCAGAGGTGCACTTGTCTCGTTTTTGAAGCCAGAGTCTTTGAAGATGTATGTGGGAAAAATGGATGAAGAATTCAGAAATCACCTTCAGATGCATTGGGAGGGGAAACACCAAGTCAAGGTATTGCCCCTGATGAAGAATCTCACGTTCAATATAATCTGCTCTCTTTTGTTTGGTCTTGAGCGTGGAAAACAGAGAGATCAGTACCTGGATTCCTTCCAAACGATGATAGAAGGAATGTGGTCAGTCCCAATTAACGTGCCCTTCACACGTTACAATCGTAGCCTTAGAGAAAGTGCAAGAATTCAGACCATGCTGAAGGAGACTGTGCAGAAGAAGAGGATTGAACTCGAGCAAAATGCAGCATCTGCACGCCAAGACTTGATTAGTTGCTTGTTAGGCATGGTTGATGAAGATGGCAAACACGTTATGACAGAGAACGAAATCCTCGACAACATTAAGCTTGTCATGGTTGCTGGACACGACACTTCATCTGTTCTAATAACTTTCATCATCAGACTTTTAGCCAACGAACCTGCTATTTATGCAGCAGTTCTTCAAGAACAGGAAGAGATAGCAAAAGGCAAGTCCTCTGGAGAGGCATTGACATGGGAAGATCTTTCAAAGATGAAGTACACATGGAGAGTAGCAATGGAAACTCTTAGAATGTTTCCTCCTATTTTTGGTGGCTTCAGAAAAGCTGCAACAGATATTGAATACGATGGATATTTCATACCCAAAGGATGGCAGATTTTCTGGGTGACAGCAATGACCCACATGGATAACAGCATTTTCTCAGAGGCATTGAAGTTTGAACCTGGTAGATTTGAAAACCAAGCATCTTTACCACCCTACTGCTTCGTTCCATTTGGTGGGGGAGCAAGAATATGTCCAGGGTATGAGTTTTCGAGGCTTGAAACTCTAGTTGCAATTCATTACCTGGTGACCCGGTTCAGTTGGAAGCTATGTTCAGACAATTTCTTCAGTAGGGATCCAATGCCAGTACCATCTCAAGGGCTACTCATTCAAATTTGGCCAAGGAGACTTTCTTAA 1425 0.4295 MNLLWLGFLFFIPILLLFRRERNPSKRVPPGSLGIPIIGQSLGLLRAMRANTAEKWVQERINKYGPISKLSLFGKPTVLIYGQAANKFVFSSGGNAIANQQTQSIKAILGDRNLLELSGEDHSRVRGALVSFLKPESLKMYVGKMDEEFRNHLQMHWEGKHQVKVLPLMKNLTFNIICSLLFGLERGKQRDQYLDSFQTMIEGMWSVPINVPFTRYNRSLRESARIQTMLKETVQKKRIELEQNAASARQDLISCLLGMVDEDGKHVMTENEILDNIKLVMVAGHDTSSVLITFIIRLLANEPAIYAAVLQEQEEIAKGKSSGEALTWEDLSKMKYTWRVAMETLRMFPPIFGGFRKAATDIEYDGYFIPKGWQIFWVTAMTHMDNSIFSEALKFEPGRFENQASLPPYCFVPFGGGARICPGYEFSRLETLVAIHYLVTRFSWKLCSDNFFSRDPMPVPSQGLLIQIWPRRLS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02782 474 CDD CYP90-like 60 470 - -
Viun8g02782 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Viun8g02782 474 Pfam Cytochrome P450 29 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 FunFam Taxadiene 5-alpha hydroxylase 19 471 - -
Viun8g02782 474 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 SUPERFAMILY Cytochrome P450 25 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 PANTHER CYTOCHROME P450 26 26 459 - -
Viun8g02782 474 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 Gene3D Cytochrome P450 19 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun8g02782 474 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02782 Viun-Chr8 36303138 36305288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02782 28 375 Cytochrome P450 AT5G36110 34.943 9.50e-74 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02782 - - gmx:100790001 845.114