Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02779 ATGAGTTTCTTTTCATGTTGCACATCATCAGAGAAGATTAACAAGAATGCATTCAGAGGGAGCAGCAGGGACTTCAATCATGCAAAATCTATGCCATCATGTGGTAGAATGTGTTTTAAACATGATCACAGCAAGAGGAAGTTCATACAACAAGAAATTGCAAAGATGGGAAGAGGGAATATTACCTCTCAGACTTTTCCTTATCATGAACTATGTGTTGCAACTGGGAATTTTAACCCTGAGAACATGATTGGTGAAGGAGGCTTTGGAAGGGTGTACAAAGGACGCATTAAAAACATAAATCAGGTTGTTGCTGTGAAGAAACTTAACAGGAATGGATTCCAAGGAAACAGGGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTCTTGCACCACCCTAACCTTGTCAATTTGGTAGGGTATTGTGCAGATGGTGAACAAAGGATTTTGGTATACGAGTACATGGCGAATGGTTCTTTAGAAGATCACCTTCTTGAACTACCTGAGGACAGAAAGCCTTTGGATTGGCATACCAGAATGAACATAGCAGCAGGTGCAGCTAAAGGACTTGAATACTTGCATGAGGTAGCAAATCCACCAGTGATATACCGTGATTTCAAATCATCAAACATACTATTGGATGAAAACTTCAATCCAAAGCTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACTGGTGATAAAACTCATGTATCCACCAGGGTGATGGGAACTTATGGCTATTGTGCACCTGAGTATGCCTCAACTGGTCAATTGACTATAAAATCAGATATATACAGCTTCGGAGTCGTATTTCTAGAGATGATCACAGGAAGAAGAGTACTTGATCAGTCAAGACCATCGGAGGAGCAAAACTTAGTCATTTGGGCACAACCACTATTCAAAGACAGAACGAAATATACATCGATGGTTGATCCATTGCTAAAAGGGAACTACCCAGCAAAGGGTCTACACCAAGCACTAGCAGTTGCAGCAATGTGCATTCAGGAGGAAGCACATACTCGACCTTTGATCAGTGACGTGGTTACAGCCATTGATGTTTTAGCAAAGACACAAAATACAACAAATACTTTTTTGGAGGACAAAGAATGCAGTTGA 1119 0.4048 MSFFSCCTSSEKINKNAFRGSSRDFNHAKSMPSCGRMCFKHDHSKRKFIQQEIAKMGRGNITSQTFPYHELCVATGNFNPENMIGEGGFGRVYKGRIKNINQVVAVKKLNRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGEQRILVYEYMANGSLEDHLLELPEDRKPLDWHTRMNIAAGAAKGLEYLHEVANPPVIYRDFKSSNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTIKSDIYSFGVVFLEMITGRRVLDQSRPSEEQNLVIWAQPLFKDRTKYTSMVDPLLKGNYPAKGLHQALAVAAMCIQEEAHTRPLISDVVTAIDVLAKTQNTTNTFLEDKECS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02779 372 PANTHER OS07G0668900 PROTEIN 29 361 - -
Viun8g02779 372 SUPERFAMILY Protein kinase-like (PK-like) 64 357 IPR011009 -
Viun8g02779 372 FunFam Serine/threonine-protein kinase PBS1 155 370 - -
Viun8g02779 372 ProSitePatterns Protein kinases ATP-binding region signature. 84 108 IPR017441 GO:0005524
Viun8g02779 372 Pfam Protein kinase domain 81 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02779 372 Gene3D Transferase(Phosphotransferase) domain 1 155 371 - -
Viun8g02779 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Viun8g02779 372 ProSiteProfiles Protein kinase domain profile. 78 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02779 372 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Viun8g02779 372 Gene3D Phosphorylase Kinase; domain 1 38 154 - -
Viun8g02779 372 CDD STKc_IRAK 84 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02779 Viun-Chr8 36278974 36281591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02779 60 356 Glycoside Hydrolase AT3G07070 69.024 1.40e-157 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Viun8g02779 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02779 - - gmx:100798032 651.744