Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02768 ATGATTTGCACGGTGAAACAGCCCGCCATATCGATCGGAGCCTCTGATGTTTTGCTACGGAAAAAGGGTTCAACTTTAGCCTCAGCTCAGTCATGTTCCCTCGTTGTCCCTTCTTCCCACCGAAGGGAAAAGACTGTGAGATCTCTTTTGTCAGTGCAAAAGCCACTGCACCTTTCATGTGTGGGGTTGGGGAATTTTGTTAGGTCTCCGGTGAGGCGTGAACGTGGTGATTTGGGGACATGTAGGGCCTATGAGGCTGAGAGACCGGAGGTGGAAGGGGCTGCTGATCCATCAGAGGCTGCTAAGAAGGTGAAAATTGGTTTATACTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTGCTGAATGCGTACCCCTACCCTTGGCTTACCTCAACACTCTCCCTTGCATGTGGGTCTCTCATGATGTTGATCTCTTGGGCCACCGGAATAGCTGAGGCTCCTAAGACCGATCTTGAGTTCTGGAAGACTTTGTTTCCTGTTGCTGTTGCACATACAATAGGACATGTAGCGGCAACTGTTAGCATGTCAAAAGTTGCAGTATCCTTCACCCACATCATAAAGAGTGGTGAACCAGCTTTCAGTGTTCTTGTTTCCAGATTTCTTCTGGGTGAGACCTTCCCGGTGCCAGTCTATCTGTCCTTAATTCCAATCATTGGTGGATGTGCACTTGCAGCTGTTACTGAGCTCAACTTCAACATGATTGGTTTTATGGGGGCTATGATATCGAATTTGGCATTCGTGTTCCGTAACATCTTTTCAAAGAAGGGTATGAAGGGAAAGGCTGTTAGTGGAATGAACTACTATGCGTGTTTGTCTATGTTGTCTCTTGTAATTCTCACACCATTTGCGATTGCTGTGGAGGGACCGCAGATGTGGGCAGCTGGATGGCAAACAGCACTCTCTCAAATCGGACCTCAATTTATATGGTGGGTGGCAGCTCAGAGTATATTCTATCACCTGTATAATCAAGTGTCGTACATGTCTCTGGATGAGATATCTCCTTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTTATAGTTTCTTCAATCATCATCTTCCACACACCAGTTCAGCCTGTTAACGCTCTTGGAGCTGCTATTGCCGTCCTCGGAACCTTCTTGTATTCACAGGCAAAACAGTAG 1194 0.4623 MICTVKQPAISIGASDVLLRKKGSTLASAQSCSLVVPSSHRREKTVRSLLSVQKPLHLSCVGLGNFVRSPVRRERGDLGTCRAYEAERPEVEGAADPSEAAKKVKIGLYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATGIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKAVSGMNYYACLSMLSLVILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAVLGTFLYSQAKQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02768 397 Pfam Triose-phosphate Transporter family 105 393 IPR004853 -
Viun8g02768 397 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 105 396 IPR004696 GO:0016020|GO:0022857|GO:0055085
Viun8g02768 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 240 - -
Viun8g02768 397 PANTHER SOLUTE CARRIER FAMILY 35 105 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02768 Viun-Chr8 36235641 36238575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02768 1 396 Antiporters AT5G54800 75.682 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02768 K15283 - gmx:100776233 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02325 6 28614360 28616639 Viun8g02768 8 36235641 36238575 ECH
Viun8g02768 8 36235641 36238575 Viun8g02768 8 36235641 36238575 ECH
Viun6g00690 6 16932458 16937036 Viun8g02768 8 36235641 36238575 PCT