Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02766 ATGGGGAAAAATGAGTTTCTCACACCAAAAGCAATTGCCAATCGAATCAAAGCAAAAGGACTGCAGAAGCTTCGGTGGTATTGCCAGATGTGCCAGAAGCAGTGCCGAGATGAAAATGGATTTAAATGCCATTGCATGAGTGAAGGGCATCAGCGTCAAATGCAAATTTTTGGACAAAACCCACACCGTATAGTTGAGGGCTATTCCGAAGAGTTTGAGAGCTCTTTTCTAGAGCACATGAAGCGCAGCCATCGATTCAGCCGTGTGGCAGCCACTGTAGTTTATAACGAATACATAAATGATAGACACCATGTTCATATGAACTCCACCCAGTGGGCAACACTTACTGAATTTGTCAAGTACTTGGGTCGAACTGGCAAATGTAAGGTCGAGGAAACACCCAAGGGATGGTTCATTACATACATAGACAGAGATTCAGAAACCCTTTTCAAGGAGAGGATGAAGAATAAGAGAATCAAGGCCGATATGGCAGATGAAGAAAAGCAAGAGAAGGAGATCAGAAAACAGATTGAAATGGCTGAGCAAATGATGCAGCAGCCTACTCCTGAGGCTGATCAGCCTTCAGATCAGCCTTCTGAGCCTCCAAGGGAACTAAATATGGAAGATGGAATTAAGATAGGGTTTTCTCTTGGGTCTTCATTGGTTAAACAAACGGTGACCAAGGAAAAACGTGAGGCACCAAGGGTGGTGTTTGAGGAGGCAGATGAAGAGAAATATGGGGATAGAAATCCTGGAAACAATTTGAAGAGGAAAGAAAGTGGTGGTGGAAAATCAACTTTGGAGGAAATGATGAGGGATGAAGAGAAGAAAAAGGAAAAAATCAACCGGAAGGATTACTGGTTGCATGAGGGAATTGTTGTTAAGGTTATGAGCAAAGTTTTGGCAGAGAAGGGTTACTACAAGCAAAAGGGTGTTGTGCGGAAGGTGATTGACAAGTATGTTGGGGAAATAGAAATACTTGAAAGTAAGCATGTGCTCAGAGTTGATCAGGCAGAGCTTGAAACTGTGATTCCACAAGTTGGTGGCCGTGTAAAAATTGTCAATGGCGCGTACAGAGGATCAATTGCGAAGTTGTTGGGAGTGGATACAGATAATTTTTGTGCTAAGGTGCAGATCGAGAAAGGACCCTATGATGGCAGAGTGCTTAAAGCTATGGAATACGAGGACATTTGCAAAGTAGCCTAG 1206 0.432 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQIFGQNPHRIVEGYSEEFESSFLEHMKRSHRFSRVAATVVYNEYINDRHHVHMNSTQWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKADMADEEKQEKEIRKQIEMAEQMMQQPTPEADQPSDQPSEPPRELNMEDGIKIGFSLGSSLVKQTVTKEKREAPRVVFEEADEEKYGDRNPGNNLKRKESGGGKSTLEEMMRDEEKKKEKINRKDYWLHEGIVVKVMSKVLAEKGYYKQKGVVRKVIDKYVGEIEILESKHVLRVDQAELETVIPQVGGRVKIVNGAYRGSIAKLLGVDTDNFCAKVQIEKGPYDGRVLKAMEYEDICKVA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02766 401 CDD KOW_KIN17 347 400 IPR041995 -
Viun8g02766 401 Pfam KN17 SH3-like C-terminal domain 283 336 IPR041330 -
Viun8g02766 401 Gene3D - 291 344 - -
Viun8g02766 401 MobiDBLite consensus disorder prediction 239 276 - -
Viun8g02766 401 FunFam DNA/RNA-binding protein kin17-like 291 344 - -
Viun8g02766 401 Coils Coil 264 284 - -
Viun8g02766 401 Gene3D - 60 160 IPR038254 -
Viun8g02766 401 Gene3D - 345 401 IPR014722 -
Viun8g02766 401 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 401 IPR037321 -
Viun8g02766 401 Coils Coil 154 186 - -
Viun8g02766 401 SMART Kin17_mid_2 52 178 IPR019447 -
Viun8g02766 401 MobiDBLite consensus disorder prediction 184 206 - -
Viun8g02766 401 FunFam DNA/RNA-binding protein KIN17, putative 61 160 - -
Viun8g02766 401 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Viun8g02766 401 SUPERFAMILY beta-beta-alpha zinc fingers 26 66 IPR036236 -
Viun8g02766 401 FunFam DNA/RNA-binding protein KIN17, putative 345 401 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02766 1 401 C2H2 Transcription Factor Family AT1G55460 68.182 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02766 K13102 - gmx:100785931 742.265