Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02762 ATGTTATTCTTGAAGGGTCAGAATCTGTCTGGTACTCTCTCACCAATGTTTTCCAAGCTTCAGTATCTCACAATATTAGACCTCAGTCGTAACATCATCACTGGTTCTATACCTTCAGAGTGGAGTACCATGGGCTTAGTTGAGATCTCTTTCATGGGAAACAAATTATCAGGGCCATTCCCCAAAGTTCTCACCAATATCACAACCCTCAAAAACTTGAGTATTGAAGGAAACCTACTTTGGGGCCACATTCCAACGGAGATTGAGAAGTTGGTCAATTTAGAAAAACTCATTCTATCATCCAATGGATTCACAGGAGCATTGCCACCGGCATTTTCCAAGTTGACCAAGTTGATTGATTTGAGGATAAGCGACAATAATTTCTTTGGGAAGATACCTGATTTCATTAGTAACTGGACAGTGATAGAAAAGCTGCATATGCACGGTTGTTCTCTTGAGGGCCCAATACCTTCTAGCATTTCTGCCTTGACAAGATTAAGTGATTTGAGGATAACTGACCTAAAAGGTGATAAAACCTCAGCTTTCCCACCACTAAATAACTTGAAATCCATGAAGACATTGGTATTAAGAAAATGCAGGATTAAAGGAGAAATCCCAGAATATATTGGGAGAATGGAAAAACTGAAAATCTTAGATTTGAGTTACAATAGCTTGAGTGGAGAGATACCTGAATCTTTTGCCGAACTTGACAAAGTAGACTTCATGTATCTTACTGGGAACAAGTTATCCGGGACTATACCACCGTGGGTCCTTGGAAACAACAAAAACATTGATGTCTCTGACAATGATTTCTCCTGGGATAGCTCAAGTCCAACTGAATGTCAACGAGGGAGCATAAACCTTGCTGAAAGCTACTCTTCATCTGTAGATACACAAAATAATATTCATTCATGCTTAAAAAGGAACTTCCCATGCCCTGCTTCAGTTAGCCAATATCAGTACGCCTTGAACATTAATTGTGGTGGTAAGGAAGCAAATATCAGCGGTCATATTTATGAAGCTGATGGTGAACGAAAAGGTGCTGCAATGTTATATTATAGTGGCCAGGATTGGGCTCTGAGCAGCACTGGAAACTTCATGGACAATGATATTGACTCTGATCCATACATTGTGGCCAATACTTCTAAACTTAATAACAATGTCTCTGCACTCAGCTCACAACTATACACAACAGCTCGTGTTTCTCCCCTTGCTCTCACATACTATGGTCTCTGTCTAATAAATGGAAATTACACAATCAAACTTCACTTTGCAGAGATTATTTTCATCAGTGATAGGTCACTTAATAGTCTTGGAAAGCGGGTATTTGACGTCTATATCCAGGGGAATTTAGTGCTGAAAGACTTTGATATCCAAAGAGAAGCTGGTGGTACTGGCAAGCCAATTGTGAGGACATTCAATGCTACTGTCACCCAACATACTTTGAAGATTCACTTCTACTGGGCTGGAAAAGGAACCACTGGCATTCCCACTAGAGGAGTTTATGGACCTCTAGTATCTGCTATTTCAGTAAACCCTAATTTTAAACCTCCATCAAGGGGTGATGACAACAGAACTCATGTCATACTGGCAATTGGCATAGTCGCTGGTGTTTTAGTTCTTCTACTTCTGGGACTGGTTTTCATGAGGTGGATGGGATGGTTAGGAGGCAATGATCCGGTGTATAAAGAGCTTAGGGGTATCGATCTGCAGACGGGATTATTTACACTAAGACAAATCAAAGCAGCAACCAAAAACTTTGATGCAGCAAACAAAATTGGCGAAGGTGGCTTTGGCTGTGTTTACAAGGGCCTACTGTCAGATGGTACAATAATAGCAGTAAAGCAGCTATCTTCAAAATCCAAACAAGGAAACCGAGAGTTTGTGAATGAGATGGGATTGATATCTGGACTCCAACATCCCAATCTTGTTAAGCTTTATGGATGTTGTGTGGAGGGAAACCAGCTAATACTGATATATGAGTATATGGAAAACAATTGTCTATCTCGGATTCTTTTTGGGAGGAATCCAGAGAGCAGAATAAAACTAGACTGGCCAACAAGGAAGAAAATTTGTCTTGGTATAGCTAAAGCTTTGGCTTACCTTCATGAAGAGTCCAGAATAAAAATCATACACAGGGATATAAAGGCAAGTAATGTATTGCTGGACAAGGATTTTAATGCTAAGGTTTCAGATTTTGGCTTGGCAAAACTTATTGAAGATGACAAAACCCATATTAGCACTCGAGTAGCAGGAACAATTGGTTACATGGCTCCTGAGTATGCAATGCGAGGCTATCTAACTGACAAAGCAGATGTTTATAGCTTTGGAGTGGTTGCACTGGAAACTGTCAGCGGAAAGAGTAATACAAATTTCAGGCCAAACGAGGATTTCGTTTATCTTCTTGATTGGGCCTATGTTTTGCAAGAGAGAGGGAGCCTTCTGGAGCTGGTTGACCCAGATTTGGGTTCAGAATATTCAACTGAGGAGGCCATGGTGGTGCTAAATGTGGCTCTCTTGTGTACCAATGCATCTCCTACACTTAGGCCAACAATGTCCCAAGCTGTGAGCATGCTTGAAGGTTGGACTGATATTCAAGATCTACTTTCTGATCCGGGATATTCAGCTGTTAGTTCCAGTTCCAAATATAAGAGTATAAGAAATCACTTCTGGCAGAATCCTAGTAGAACACATAGCATGTCAATACCTAGTGTATATACTGATTCCTCTGGCTCTCATGTTGAAACAGAAAAGAGCTATCGTCTTGTAACAACAGTTAATTCAGATGGATCCAATACCCAAGAAAGTGGAGTGCTATAA 2820 0.405 MLFLKGQNLSGTLSPMFSKLQYLTILDLSRNIITGSIPSEWSTMGLVEISFMGNKLSGPFPKVLTNITTLKNLSIEGNLLWGHIPTEIEKLVNLEKLILSSNGFTGALPPAFSKLTKLIDLRISDNNFFGKIPDFISNWTVIEKLHMHGCSLEGPIPSSISALTRLSDLRITDLKGDKTSAFPPLNNLKSMKTLVLRKCRIKGEIPEYIGRMEKLKILDLSYNSLSGEIPESFAELDKVDFMYLTGNKLSGTIPPWVLGNNKNIDVSDNDFSWDSSSPTECQRGSINLAESYSSSVDTQNNIHSCLKRNFPCPASVSQYQYALNINCGGKEANISGHIYEADGERKGAAMLYYSGQDWALSSTGNFMDNDIDSDPYIVANTSKLNNNVSALSSQLYTTARVSPLALTYYGLCLINGNYTIKLHFAEIIFISDRSLNSLGKRVFDVYIQGNLVLKDFDIQREAGGTGKPIVRTFNATVTQHTLKIHFYWAGKGTTGIPTRGVYGPLVSAISVNPNFKPPSRGDDNRTHVILAIGIVAGVLVLLLLGLVFMRWMGWLGGNDPVYKELRGIDLQTGLFTLRQIKAATKNFDAANKIGEGGFGCVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEMGLISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRILFGRNPESRIKLDWPTRKKICLGIAKALAYLHEESRIKIIHRDIKASNVLLDKDFNAKVSDFGLAKLIEDDKTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALETVSGKSNTNFRPNEDFVYLLDWAYVLQERGSLLELVDPDLGSEYSTEEAMVVLNVALLCTNASPTLRPTMSQAVSMLEGWTDIQDLLSDPGYSAVSSSSKYKSIRNHFWQNPSRTHSMSIPSVYTDSSGSHVETEKSYRLVTTVNSDGSNTQESGVL 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02762 939 Gene3D - 317 514 - -
Viun8g02762 939 SMART serkin_6 587 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02762 939 FunFam Leucine-rich repeat receptor protein kinase EMS1 13 110 - -
Viun8g02762 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Viun8g02762 939 Pfam Malectin domain 322 509 IPR021720 -
Viun8g02762 939 SUPERFAMILY Protein kinase-like (PK-like) 571 889 IPR011009 -
Viun8g02762 939 Gene3D Transferase(Phosphotransferase) domain 1 663 871 - -
Viun8g02762 939 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 557 662 - -
Viun8g02762 939 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 139 287 - -
Viun8g02762 939 ProSiteProfiles Protein kinase domain profile. 587 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02762 939 ProSitePatterns Protein kinases ATP-binding region signature. 593 615 IPR017441 GO:0005524
Viun8g02762 939 Gene3D Ribonuclease Inhibitor 107 280 IPR032675 -
Viun8g02762 939 SUPERFAMILY L domain-like 3 272 - -
Viun8g02762 939 FunFam Putative LRR receptor-like serine/threonine-protein kinase 663 871 - -
Viun8g02762 939 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 320 514 - -
Viun8g02762 939 Gene3D Phosphorylase Kinase; domain 1 562 662 - -
Viun8g02762 939 CDD STKc_IRAK 593 861 - -
Viun8g02762 939 Gene3D Ribonuclease Inhibitor 1 106 IPR032675 -
Viun8g02762 939 Pfam Protein tyrosine and serine/threonine kinase 590 857 IPR001245 GO:0004672|GO:0006468
Viun8g02762 939 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 893 - -
Viun8g02762 939 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02762 Viun-Chr8 36181099 36190210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02762 121 923 Receptor kinase-like Gene Family AT1G07650 65.675 0.0 1032
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun8g02762 PK_Tyr_Ser-Thr 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02762 - - vun:114195543 1843.94