Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02761 ATGGAGCCCAACTTGGGAGATTCCAGGGTGTTCCTTTCACTCTTCCTTGCTTCAACTTCATTGATTTTCCTCTCACACTTGGCTTCTGCAGCCACTCCCAAGCTCAACGCTCAAGAGGTGAAGGCACTGAAGGATATAGGGAGCAAGATTGGGAAGAAAGATTGGGATTTTGGAGTGGATCCTTGCAGTGGAAAAGGGAGTTGGAATGTTTCTGATGATAGGAAAGGCTTTCAGAGCTCTGTGATGTGTGATTGTTCCTTCAATAACAGTACTTCTTGCCATGTTGTAAGCATATTCTTGAAGGGTCAGAATCTGTCTGGTACTCTCTCACCAATGTTTTCCAAGCTTCAGTATCTCACAATATTAGACCTCAGTCGTAACATCATCACTGGTTCTATACCTTCAGAGTGGAGTACCATGGGCTTAGTTGAGATCTCTTTCATGGGAAACAAATTATCAGGGCCATTCCCCAAAGTTCTCACCAATATCACAACCCTCAAAAACTTGAGTATTGAAGGAAACCTACTTTGGGGCCACATTCCAACGGAGATTGAGAAGTTGGTCAATTTAGAAAAACTCATTCTATCATCCAATGGATTCACAGGAGCATTGCCACCGGCATTTTCCAAGTTGACCAAGTTGATTGATTTGAGGATAAGCGACAATAATTTCTTTGGGAAGATACCTGATTTCATTAGTAACTGGACAGTGATAGAAAAGCTGCATATGCACGGTTGTTCTCTTGAGGGCCCAATACCTTCTAGCATTTCTGCCTTGACAAGATTAAGTGATTTGAGGATAACTGACCTAAAAGGTGATAAAACCTCAGCTTTCCCACCACTAAATAACTTGAAATCCATGAAGACATTGGTATTAAGAAAATGCAGGATTAAAGGAGAAATCCCAGAATATATTGGGAGAATGGAAAAACTGAAAATCTTAGATTTGAGTTACAATAGCTTGAGTGGAGAGATACCTGAATCTTTTGCCGAACTTGACAAAGTAGACTTCATGTATCTTACTGGGAACAAGTTATCCGGGACTATACCACCGTGGGTCCTTGGAAACAACAAAAACATTGATGTCTCTGACAATGATTTCTCCTGGGATAGCTCAAGTCCAACTGAATGTCAACGAGGGAGCATAAACCTTGCTGAAAGCTACTCTTCATCTGTAGATACACAAAATAATATTCATTCATGCTTAAAAAGGAACTTCCCATGCCCTGCTTCAGTTAGCCAATATCAGTACGCCTTGAACATTAATTGTGGTGGTAAGGAAGCAAATATCAGCGGTCATATTTATGAAGCTGATGGTGAACGAAAAGGTGCTGCAATGTTATATTATAGTGGCCAGGATTGGGCTCTGAGCAGCACTGGAAACTTCATGGACAATGATATTGACTCTGATCCATACATTGTGGCCAATACTTCTAAACTTAATAACAATGTCTCTGCACTCAGCTCACAACTATACACAACAGCTCGTGTTTCTCCCCTTGCTCTCACATACTATGGTCTCTGTCTAATAAATGGAAATTACACAATCAAACTTCACTTTGCAGAGATTATTTTCATCAGTGATAGGTCACTTAATAGTCTTGGAAAGCGGGTATTTGACGTCTATATCCAGGGGAATTTAGTGCTGAAAGACTTTGATATCCAAAGAGAAGCTGGTGGTACTGGCAAGCCAATTGTGAGGACATTCAATGCTACTGTCACCCAACATACTTTGAAGATTCACTTCTACTGGGCTGGAAAAGGAACCACTGGCATTCCCACTAGAGGAGTTTATGGACCTCTAGTATCTGCTATTTCAGTAAACCCTAATTTTAAACCTCCATCAAGGGGTGATGACAACAGAACTCATGTCATACTGGCAATTGGCATAGTCGCTGGTGTTTTAGTTCTTCTACTTCTGGGACTGGTTTTCATGAGGTGGATGGGATGGTTAGGAGGCAATGATCCGGTGTATAAAGAGCTTAGGGGTATCGATCTGCAGACGGGATTATTTACACTAAGACAAATCAAAGCAGCAACCAAAAACTTTGATGCAGCAAACAAAATTGGCGAAGGTGGCTTTGGCTGTGTTTACAAGGGCCTACTGTCAGATGGTACAATAATAGCAGTAAAGCAGCTATCTTCAAAATCCAAACAAGGAAACCGAGAGTTTGTGAATGAGATGGGATTGATATCTGGACTCCAACATCCCAATCTTGTTAAGCTTTATGGATGTTGTGTGGAGGGAAACCAGCTAATACTGATATATGAGTATATGGAAAACAATTGTCTATCTCGGATTCTTTTTGGGAGGAATCCAGAGAGCAGAATAAAACTAGACTGGCCAACAAGGAAGAAAATTTGTCTTGGTATAGCTAAAGCTTTGGCTTACCTTCATGAAGAGTCCAGAATAAAAATCATACACAGGGATATAAAGGCAAGTAATGTATTGCTGGACAAGGATTTTAATGCTAAGGTTTCAGATTTTGGCTTGGCAAAACTTATTGAAGATGACAAAACCCATATTAGCACTCGAGTAGCAGGAACAATTGGTTACATGGCTCCTGAGTATGCAATGCGAGGCTATCTAACTGACAAAGCAGATGTTTATAGCTTTGGAGTGGTTGCACTGGAAACTGTCAGCGGAAAGAGTAATACAAATTTCAGGCCAAACGAGGATTTCGTTTATCTTCTTGATTGGGCCTATGTTTTGCAAGAGAGAGGGAGCCTTCTGGAGCTGGTTGACCCAGATTTGGGTTCAGAATATTCAACTGAGGAGGCCATGGTGGTGCTAAATGTGGCTCTCTTGTGTACCAATGCATCTCCTACACTTAGGCCAACAATGTCCCAAGCTGTGAGCATGCTTGAAGGTTGGACTGATATTCAAGATCTACTTTCTGATCCGGGATATTCAGCTGTTAGTTCCAGTTCCAAATATAAGAGTATAAGAAATCACTTCTGGCAGAATCCTAGTAGAACACATAGCATGTCAATACCTAGTGTATATACTGATTCCTCTGGCTCTCATGTTGAAACAGAAAAGAGCTATCGTCTTGTAACAACAGTTAATTCAGATGGATCCAATACCCAAGAAAGTGGAGTGCTATAA 3108 0.4099 MEPNLGDSRVFLSLFLASTSLIFLSHLASAATPKLNAQEVKALKDIGSKIGKKDWDFGVDPCSGKGSWNVSDDRKGFQSSVMCDCSFNNSTSCHVVSIFLKGQNLSGTLSPMFSKLQYLTILDLSRNIITGSIPSEWSTMGLVEISFMGNKLSGPFPKVLTNITTLKNLSIEGNLLWGHIPTEIEKLVNLEKLILSSNGFTGALPPAFSKLTKLIDLRISDNNFFGKIPDFISNWTVIEKLHMHGCSLEGPIPSSISALTRLSDLRITDLKGDKTSAFPPLNNLKSMKTLVLRKCRIKGEIPEYIGRMEKLKILDLSYNSLSGEIPESFAELDKVDFMYLTGNKLSGTIPPWVLGNNKNIDVSDNDFSWDSSSPTECQRGSINLAESYSSSVDTQNNIHSCLKRNFPCPASVSQYQYALNINCGGKEANISGHIYEADGERKGAAMLYYSGQDWALSSTGNFMDNDIDSDPYIVANTSKLNNNVSALSSQLYTTARVSPLALTYYGLCLINGNYTIKLHFAEIIFISDRSLNSLGKRVFDVYIQGNLVLKDFDIQREAGGTGKPIVRTFNATVTQHTLKIHFYWAGKGTTGIPTRGVYGPLVSAISVNPNFKPPSRGDDNRTHVILAIGIVAGVLVLLLLGLVFMRWMGWLGGNDPVYKELRGIDLQTGLFTLRQIKAATKNFDAANKIGEGGFGCVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEMGLISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRILFGRNPESRIKLDWPTRKKICLGIAKALAYLHEESRIKIIHRDIKASNVLLDKDFNAKVSDFGLAKLIEDDKTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALETVSGKSNTNFRPNEDFVYLLDWAYVLQERGSLLELVDPDLGSEYSTEEAMVVLNVALLCTNASPTLRPTMSQAVSMLEGWTDIQDLLSDPGYSAVSSSSKYKSIRNHFWQNPSRTHSMSIPSVYTDSSGSHVETEKSYRLVTTVNSDGSNTQESGVL 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02761 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Viun8g02761 1035 SUPERFAMILY L domain-like 83 368 - -
Viun8g02761 1035 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 235 383 - -
Viun8g02761 1035 SMART serkin_6 683 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02761 1035 Gene3D Transferase(Phosphotransferase) domain 1 759 967 - -
Viun8g02761 1035 Pfam Protein tyrosine and serine/threonine kinase 686 953 IPR001245 GO:0004672|GO:0006468
Viun8g02761 1035 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 22 989 - -
Viun8g02761 1035 Gene3D - 413 610 - -
Viun8g02761 1035 Gene3D Ribonuclease Inhibitor 52 167 IPR032675 -
Viun8g02761 1035 Gene3D Ribonuclease Inhibitor 176 272 IPR032675 -
Viun8g02761 1035 Gene3D Ribonuclease Inhibitor 273 401 IPR032675 -
Viun8g02761 1035 ProSitePatterns Protein kinases ATP-binding region signature. 689 711 IPR017441 GO:0005524
Viun8g02761 1035 CDD STKc_IRAK 689 957 - -
Viun8g02761 1035 FunFam Putative LRR receptor-like serine/threonine-protein kinase 759 967 - -
Viun8g02761 1035 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 41 204 - -
Viun8g02761 1035 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 416 610 - -
Viun8g02761 1035 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 653 758 - -
Viun8g02761 1035 Gene3D Phosphorylase Kinase; domain 1 658 758 - -
Viun8g02761 1035 ProSiteProfiles Protein kinase domain profile. 683 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02761 1035 Pfam Malectin domain 418 605 IPR021720 -
Viun8g02761 1035 SUPERFAMILY Protein kinase-like (PK-like) 667 985 IPR011009 -
Viun8g02761 1035 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02761 Viun-Chr8 36181099 36191055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02761 151 224 Receptor kinase-like Gene Family AT1G07650 36.486 2.49e-06 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun8g02761 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02761 - - vun:114195543 2041.16