Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02755 ATGGAAGCCAAGAAGCTTCAGCTTCGTTTCTCGCTCGGCCGGCAATCCTCTCTAGCGCCGGAGCGCGACGGCGCAGGCGATGTGTCGGAGGCGCTGGATCCAACGGTTCGGTTGATGTATCTGGCCAACGAAGGAGACTTGGACGGGATTGAGGAACTGCTGGACGCGGGGAGCGACGTCAATTTCACCGACATTGACGGCCGCACCGCACTCCACGTCGCCGCCTGCCAGGGACGCACCGACGTTGTTGAGTTGCTGCTACGACGAGGCGCTGAAGTTGATCCGCGAGACCGTTGGGGCAGCACCCCTCTAGCTGATGCAATGTACTATAAAAACCACGACGTAGTGAAGCTTTTGGAGAAACACGGTGCAAAACCTCCGATAACTCCCATGCATGTGGAGAATGCTCGAGAAGTCCCAGAGTATGAGATTGATCCTTCTGAACTTGATTTTACTAATAGTGTTTGCATAACAAAGGGAACTTTCCGGATTGCATTATGGCGTGGAACTCGGGTTGCTGTCAAGACACTTGGGGAGGAAGTGTTCGCTGATGATGATAAAGTAAGAGCATTTCATGATGAGCTTACATTGCTTGAGAAAATAAGGCATCCAAATGTTGTTCAGTTTTTAGGTGCTGTAACCCAAAGCACTCCAATGATTATCGTCACAGAATATCTACCCCAGGGGGATCTTCGTGCCTACATGAAGCGGAAAGGTGCATTAAAACCAGTAACAGCTGTAAAATTTGCACTTGATATTGCTAGGGGTATGAACTATTTGCACGAACATAAACCTGAAGCCATTATACACCGAGATCTTGAGCCTTCAAATATTTTGCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTTGCTTAAAGTCGCTAAAACAGTCAAGGAAGACAAACCCGTGACAAGCCTGGATACATCATGGCGATATGTTGCACCGGAAGTATATAGAAATGAGGAATACGACACAAAAGTGGATGTGTTTTCTTTTGCTCTGATATTACAGGAGATGATTGAAGGTTGTCCACCGTTCTATGAAAAACCAGAAAACGAAGTTCCTAAAGCGTATGTTGAAAATGAGCGCCCACCATTTAGAGCGTTGCCAAAGCTTTACGCTTATGGACTTAAACAGTTAATTGAGGAATGCTGGGATGAAAAACCACACAGAAGGCCAACATTTAGGCAAATAATTGACAGATTGGAAGACATAAACAGCCATTTTGTACAAAAGAGGCGCTGGAAGATTGGAGCTGCTGGATGCATCCAGCACCTGGAGGCGCTATTTAGGGGTAATCGCACAAGTCCAAGTAGCCGATCATCTCGCTCCACGGCCAGATAA 1362 0.4721 MEAKKLQLRFSLGRQSSLAPERDGAGDVSEALDPTVRLMYLANEGDLDGIEELLDAGSDVNFTDIDGRTALHVAACQGRTDVVELLLRRGAEVDPRDRWGSTPLADAMYYKNHDVVKLLEKHGAKPPITPMHVENAREVPEYEIDPSELDFTNSVCITKGTFRIALWRGTRVAVKTLGEEVFADDDKVRAFHDELTLLEKIRHPNVVQFLGAVTQSTPMIIVTEYLPQGDLRAYMKRKGALKPVTAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTSLDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCPPFYEKPENEVPKAYVENERPPFRALPKLYAYGLKQLIEECWDEKPHRRPTFRQIIDRLEDINSHFVQKRRWKIGAAGCIQHLEALFRGNRTSPSSRSSRSTAR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02755 453 Gene3D - 28 139 IPR036770 -
Viun8g02755 453 SMART ANK_2a 66 95 IPR002110 GO:0005515
Viun8g02755 453 SMART ANK_2a 99 128 IPR002110 GO:0005515
Viun8g02755 453 SMART ANK_2a 32 62 IPR002110 GO:0005515
Viun8g02755 453 FunFam serine/threonine-protein kinase STY46-like 144 227 - -
Viun8g02755 453 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Viun8g02755 453 PRINTS Tyrosine kinase catalytic domain signature 223 236 IPR001245 GO:0004672|GO:0006468
Viun8g02755 453 PRINTS Tyrosine kinase catalytic domain signature 379 401 IPR001245 GO:0004672|GO:0006468
Viun8g02755 453 PRINTS Tyrosine kinase catalytic domain signature 262 280 IPR001245 GO:0004672|GO:0006468
Viun8g02755 453 PRINTS Tyrosine kinase catalytic domain signature 333 355 IPR001245 GO:0004672|GO:0006468
Viun8g02755 453 SUPERFAMILY Ankyrin repeat 37 129 IPR036770 -
Viun8g02755 453 Gene3D Transferase(Phosphotransferase) domain 1 227 427 - -
Viun8g02755 453 Pfam Ankyrin repeats (3 copies) 38 126 IPR002110 GO:0005515
Viun8g02755 453 CDD STKc_MAP3K-like 165 408 - -
Viun8g02755 453 FunFam Os01g0748600 protein 137 428 - -
Viun8g02755 453 SUPERFAMILY Protein kinase-like (PK-like) 157 409 IPR011009 -
Viun8g02755 453 Pfam Protein tyrosine and serine/threonine kinase 169 408 IPR001245 GO:0004672|GO:0006468
Viun8g02755 453 FunFam Integrin-linked protein kinase family 16 142 - -
Viun8g02755 453 ProSiteProfiles Protein kinase domain profile. 151 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02755 453 PIRSF ILK 2 429 - -
Viun8g02755 453 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
Viun8g02755 453 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 130 411 - -
Viun8g02755 453 Gene3D Phosphorylase Kinase; domain 1 144 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02755 Viun-Chr8 36144309 36150448 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02755 1 423 MAP Kinase Kinase Kinase AT4G18950 66.667 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Viun8g02755 PK_Tyr_Ser-Thr 1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02755 - - gmx:100795964 820.461