Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02735 ATGCAGCAAGATCACAGAAAAAAGGGTTCGATGGAGATGGAATTTTTCTCCGATTATGGCGATGCCAACAGGTACAAAATTCAAGAGGTCATTGGGAAAGGGAGTTATGGTGTTGTTTGTTCAGCTATAGACACTCATACTGGCGAGAAAGTAGCAATTAAAAAGATACATGATATCTTCGAGCATGTATCTGATACTGCTCGTATTCTCCGTGAGATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATTAAGCATGTTATGTTGCCACCTTCGAGGAGGGACTTTAAGGATATTTATGTCGTTTTTGAGCTAATGGAGTCTGATCTGCATCAAGTCATTAAAGCCAATGATGACTTAACAAAAGAGCACTATCAATTTTTTCTTTACCAGTTACTTCGAGCACTGAAGTATATTCACACTGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATATTAGCCAATGCAAACTGTAAACTTAAAATATGTGATTTTGGGTTAGCCAGAGTTGCTTTTAGTGACACGCCAACAACTGTATTTTGGACGGATTATGTTGCTACACGGTGGTATAGAGCACCGGAGCTATGTGGATCCTTTTACTCGAGGTATACTCCAGCAATTGATATTTGGAGTATAGGTTGCATCTTTGCTGAAGTATTGATAGGAAAGCCTCTTTTTCCTGGAAAAAATGTTGTGCATCAGTTGGATCTGATGACAGATCTGCTTGGTACGCCCTCGCTTGATACGATATCCCGGGTACGCAATGATAAGGCAAGGAGATACCTGACTAGTATGAGGAAAAAACAGCCTATACCATTTGCACAAAAATTTCCTAATGCAGATCCTTTAGCACTACGACTACTTGAAAAGTTGCTCGCCTTTGATCCGAAAGACCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTTGCGAAAGTTGAGAGGGAACCATCATGCCAGCCTATTACAAAAATGGAGTTTGAATTCGAAAGGAGAAGAGTCACAAAGGAAGAAATTGGAGAGTTAATTTTTCGTGAGATTCTAGAGTATCATCCTCAACTATTGAAAGACTACATAAATGGAACAGAGAGAACTAATTTTCTTTACCCAAGTGCTGTTGATCAATTCAAGAAGCAATTTGCTCATCTTGAGGAAACTAGTGGCAAAAGTAGTCCAGTTCTGCCACCTGAAAGAAAGCATGTATCACTTCCCAGGTCAACAATTATACATTCAAATATAGTACCCACAAAAGAGCAATCAAATATTGCTTCCAGCAAAATCAGGCAAACAACTGAGGAACACAGCAATAATTCGAGGGATACAGAAAACCCTGCGCCAAGGTCCATTCAGGGTCTGCAAAAATTTTCACATGCAAAACCTGGTAAAGTTGTTGGGCCGGTTATTCCATACGAGTATGCAAGTGTTGTCAAGGGTTCATATGAGCCCAGGACATTTATGAGAGCTTCTGTTCCTCCTTCTCAACCTACCCCGACAAATCATTATCAAAGATTAACCTCTGGGAAACAAGAAAGGTCAGCAACAGAAGCTGAGAAGTGTGTGTCTTTACAATCAAAACTTGCACAGCAATGTTGTGTGAATGGCCAAATAGCACCAGAAACAGCTATAAATATTGATTCCAACCCTTTTTTCATGACACGAGCAGGAGTGAACAAGATAGAGCAGGATGACCGAATAGCCATTGACACAAAGTTGCTGCAATCAAAAGCTCATCAATATGGTGGGATTAGTACAACTGCTCATAGAAAGGTTGGACCAGTACAATATGGTATTACAAGGTTGTTCTAG 1833 0.4021 MQQDHRKKGSMEMEFFSDYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHVSDTARILREIKLLRLLRHPDIVEIKHVMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSRYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPIPFAQKFPNADPLALRLLEKLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIGELIFREILEYHPQLLKDYINGTERTNFLYPSAVDQFKKQFAHLEETSGKSSPVLPPERKHVSLPRSTIIHSNIVPTKEQSNIASSKIRQTTEEHSNNSRDTENPAPRSIQGLQKFSHAKPGKVVGPVIPYEYASVVKGSYEPRTFMRASVPPSQPTXPTNHYQRLTSGKQERSATEAEKCVSLQSKLAQQCCVNGQIAPETAINIDSNPFFMTRAGVNKIEQDDRIAIDTKLLQSKAHQYGGISTTAHRKVGPVQYGITRLF 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02735 611 FunFam Mitogen-activated protein kinase 15 118 - -
Viun8g02735 611 MobiDBLite consensus disorder prediction 421 465 - -
Viun8g02735 611 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02735 611 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02735 611 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Viun8g02735 611 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02735 611 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Viun8g02735 611 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 379 - -
Viun8g02735 611 MobiDBLite consensus disorder prediction 421 440 - -
Viun8g02735 611 CDD STKc_TDY_MAPK 24 361 - -
Viun8g02735 611 FunFam Mitogen-activated protein kinase 111 339 - -
Viun8g02735 611 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Viun8g02735 611 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Viun8g02735 611 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02735 Viun-Chr8 36060258 36066065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02735 1 434 MAP Kinase Gene Family AT2G42880 87.788 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Viun8g02735 Pkinase 5.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02735 - - aprc:113848523 1048.88