Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02729 ATGGAAAGTCCTATCTTCTTTACACCACCTTGCTCTCCACTACCAATGCAAGAATGTTCCCCACCATCACCCATGCAGTCTTCTTCCACCTTTAGAGCTAACTCTGCCAGCAGCAGAAAAATTTTACGACGTACACGTTCTGCGCCATGTCTTTTGTTTGCTCAAACTCAGGTTGATGAGCCCTCTGAACCACCACAAATGTCACCAATATTCATCATCAGAAAATCTTTAATTAGTCTTTACATGTATATGTTAGTTGGGGTAGTAGTATACATTCATAGCGGGAGTTTGAAGGGCACTAACACTCACCCGTATGTGGATGCTGCATACTTTACCATGGTAACTCTATGCACAGTGGGGTATGGAGATATGGTTCCTAACTCCAATTATATTAGAATCTTTACGTCTGTTTTCATTTTACTGGGATTTGCAAATATTGGTTTTCTGTTGAATGGGTTGGTTGCACACATATGCAATTCCCAAGAAAAATTCTGGTTGAAAGTGCTACATAAGACTAGATACACAAAAATTATCAGAAGGTATATAGCTGATGAAGAGGGAGGAGGGAGAATGAGGACAAGAACAAAGGTTTTTCTTGCTTTAACGGTTATAACTAGTTGCATTGCTGTAGGAGCAGTCGCATTGCACCTCCTTGAAGACCTGAGTTGGGAAGACAGCATTTATCTCTCTGTCACCACTGTTACAACGGTTGGGTATGGAGATTTTTCTATGAAAACAGTGGGGGGAAGGTGCTTTGCTATTATATGGCTTTTGGTAAGCACATTGGCAGTTGCCAAGGCCTTTACATACTTCACGGAATATAACATTGAAGAGAGGAATCGCAACATGGAAAAATGGATTCTTCATAAGAAATTAAGGTTGTCTGATTTACTCTCTGCAGACCTCGATAACGATGGGTCAATCAGGATGCCCGAATTTGTCCTATACAAGCTAAAACAAATGGGCAAGATTACACAGTCTGACATCCAGCAAATAAGGAAAGAATTTGATTCCTTGGGACATGGCAAAATTACTCTGTCTGACCTAATGAGAAATGTGTAA 1062 0.4049 MESPIFFTPPCSPLPMQECSPPSPMQSSSTFRANSASSRKILRRTRSAPCLLFAQTQVDEPSEPPQMSPIFIIRKSLISLYMYMLVGVVVYIHSGSLKGTNTHPYVDAAYFTMVTLCTVGYGDMVPNSNYIRIFTSVFILLGFANIGFLLNGLVAHICNSQEKFWLKVLHKTRYTKIIRRYIADEEGGGRMRTRTKVFLALTVITSCIAVGAVALHLLEDLSWEDSIYLSVTTVTTVGYGDFSMKTVGGRCFAIIWLLVSTLAVAKAFTYFTEYNIEERNRNMEKWILHKKLRLSDLLSADLDNDGSIRMPEFVLYKLKQMGKITQSDIQQIRKEFDSLGHGKITLSDLMRNV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02729 353 MobiDBLite consensus disorder prediction 21 40 - -
Viun8g02729 353 Gene3D - 179 297 - -
Viun8g02729 353 Gene3D - 68 178 - -
Viun8g02729 353 SUPERFAMILY Voltage-gated potassium channels 69 156 - -
Viun8g02729 353 SUPERFAMILY Voltage-gated potassium channels 168 291 - -
Viun8g02729 353 Pfam Ion channel 80 153 IPR013099 -
Viun8g02729 353 Pfam Ion channel 203 274 IPR013099 -
Viun8g02729 353 PRINTS Two pore domain K+ channel signature 114 142 IPR003280 GO:0005267|GO:0016020|GO:0071805
Viun8g02729 353 PRINTS Two pore domain K+ channel signature 235 244 IPR003280 GO:0005267|GO:0016020|GO:0071805
Viun8g02729 353 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 50 154 IPR003280 GO:0005267|GO:0016020|GO:0071805
Viun8g02729 353 SUPERFAMILY EF-hand 300 351 IPR011992 -
Viun8g02729 353 FunFam Two-pore potassium channel 2-like 174 299 - -
Viun8g02729 353 Gene3D - 298 353 - -
Viun8g02729 353 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02729 Viun-Chr8 36029457 36030866 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02729 26 350 Ion Channels AT4G01840 43.235 9.79e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02729 K05389 - gmx:100789639 382.489