Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02725 ATGGCGAATGAGAAGGATCGTTTTTTCGACCCTTTTCATTACAACCACCATGAACACCAACTCAACCACTCTTCAAACTTTCCATTCTTTAGGGACAACAACTCTGCACCAATTTCCTCATCACAAAACTTTCAAGCCTTTGATCATCATCAGCATGATCCTTCTCATCAACGCACCACTTTCACTGACTGTTTACATGGTTCCATGGATTACAACACCCTCTCTAGAGCCTTTGACATGTCGTGTTCATCATCTGAAGTGATCTCCTCCATTGATGAAAACCCCAAGAAGCCTAGTGCAGGAGACTCAGCAGGGATCAGTGGGAACCACTCAACACCCAATTCATCTGTTTCCTCGTCATCCAATGAAGCTGAAGCACTGATAGAAGAAGACTCAACCAAAAGCCAGAAGAAAGATAAACAGCCAAAAGGGTGCGAAGATGGAGAAGAAAAGCCTAAGAAAGAGAACAAGCCTAAAAAGAAAGAGAAAAAGCCAAGAGAGCCTCGTTTTGCCTTCTTGACTAAAAGTGAGATCGACAACCTTGAAGATGGTTACAGATGGAGAAAGTATGGACAGAAAGCAGTCAAGAACAGTCCCTATCCAAGGAGCTACTATAGGTGCACCAGTCAGAAGTGCAGCGTGAAGAAAAGGGTGGAAAGATCATTCCAAGATCCATCGATTGTGATCACAACATACGAAGGGCAACACAACCATCACTGTCCAGCAACATTAAGAGGCAGTGCTGCCACCATGTTATCAGCACCTCCATTTTTTGGTTCCTCTTACATGGGCTCAAGCTTACCCCAAGATTTTCTTGCTCAGTTGCTTCCAAGTTATAGCCAAAATGATCATCAAAATCCAATGTTCAACCAAAACCTCTCCAACAATCTCCATCTCCAGCAACAACACCAGCAGCAGCAGCACCAGTTCCAACTACCTCGTGACTATGGTTTGCTGCAAGACCTGTTGCCATCATCATTCCCAGGCAAACAAGAGCCATGA 1002 0.4431 MANEKDRFFDPFHYNHHEHQLNHSSNFPFFRDNNSAPISSSQNFQAFDHHQHDPSHQRTTFTDCLHGSMDYNTLSRAFDMSCSSSEVISSIDENPKKPSAGDSAGISGNHSTPNSSVSSSSNEAEALIEEDSTKSQKKDKQPKGCEDGEEKPKKENKPKKKEKKPREPRFAFLTKSEIDNLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCSVKKRVERSFQDPSIVITTYEGQHNHHCPATLRGSAATMLSAPPFFGSSYMGSSLPQDFLAQLLPSYSQNDHQNPMFNQNLSNNLHLQQQHQQQQHQFQLPRDYGLLQDLLPSSFPGKQEP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02725 333 SUPERFAMILY WRKY DNA-binding domain 174 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02725 333 Gene3D WRKY domain 166 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun8g02725 333 FunFam WRKY transcription factor 57 167 241 - -
Viun8g02725 333 Pfam WRKY DNA -binding domain 182 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02725 333 MobiDBLite consensus disorder prediction 104 126 - -
Viun8g02725 333 MobiDBLite consensus disorder prediction 127 172 - -
Viun8g02725 333 MobiDBLite consensus disorder prediction 89 172 - -
Viun8g02725 333 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 302 IPR044810 GO:0003700
Viun8g02725 333 ProSiteProfiles WRKY domain profile. 176 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun8g02725 333 SMART WRKY_cls 181 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02725 Viun-Chr8 36006846 36009218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02725 60 246 WRKY Transcription Factor Family AT4G18170 57.812 1.79e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun8g02725 WRKY 8.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02725 - - gmx:100806016 491.886