Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02723 ATGTCATCCAACAGTTCTTTGAAAGGGGAATTGACAAAGAAGACACCATTTTTGGGGTTGAGACGATGGGTTTTGATTGGAGTAGGTGTTGGTGCATTTATAGTGCTTATTCTTTGTATATTATCGATATGGGTGATGTTTCGGAGAAAGTCTAGGAGATCATTGGACAAGTATTCTGTATCTCAAATACCAAATGTCTCCAAAGATATCGACGTTGACAAGGTTGGGGTGCAGAGTTCTCATGTCCAACCAGAAAATGTGCTTATGCCTGTTCATAGCATGACAAGTGATAAGAATTCAGATAATATATCAGTTCATTTGGGTAACAGAAAATCTGGAGATCCTGATAATATCAGTCAGTGTAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCAATGTCAGCTGAAGAAGGAAGCTCTGGGAATGTTAAGAAACAATCTACATTGTCACATGGAGGGTTGGCCACTGCCTCTCCATTAGTTGGCTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTCAGGGATCTGGAAATGGCCACCAAACGATTCTCAGCTGAGAACATTATTGGTGAGGGTGGATATGGTGTTGTTTACAAGGGAATACTGATTAATGGAATTGAGGTGGCAGTGAAGAAGCTTCTTAACAACTTGGGACAAGCTGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGACATGTTAGACATAAGCATCTTGTACGCCTACTCGGATATTGTGTAGAGGGAGTTCATAGGCTGCTTGTGTATGAATATGTGAACAATGGTAACTTAGAACAGTGGTTACATGGAAACATGCACCAACATGGGACACTTACTTGGGAGGCCCGCTTGAAAGTTATACTCGGCACTGCCAAAGCGCTTGCTTATCTACATGAAGCAATAGAACCAAAGGTTATTCATCGGGATATAAAGTCTAGCAACATATTGATTGATGATGAATTCAATGCAAAGGTTTCTGATTTCGGCTTGGCCAAACTTTTGGATTCAGGAGAAAGTTACATAACCACAAGAGTAATGGGAACGTTTGGTTATGTGGCACCAGAATACGCCAACAGCGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCTTGCTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCTCGTCCTGCCAATGAGGTTAATCTAGTTGAATGGCTCAAAATGATGGTTGGAACAAGAAGGGCTGAGGAAGTAGTGGACTCAAACCTTGAAGTTAAACCACCGCTGCGCGCTTTGAAGCGCACTCTTCTGGTTGCACTTAGATGTATTGATCCTGATGCTGACAAGAGGCCCAAAATGAGTCAAGTTGTGAGAATGCTTGAAGCTGACGAATATCCGTACCGAGAGGATAGAAGAAACAGAAAGAGTGGCACTGTCAACATGGAAATTGAAACTGTGAAGGATATTTCGGGTCCATCTGATGCTGAAAGGATGAAGGATAGGAATTGA 1506 0.4223 MSSNSSLKGELTKKTPFLGLRRWVLIGVGVGAFIVLILCILSIWVMFRRKSRRSLDKYSVSQIPNVSKDIDVDKVGVQSSHVQPENVLMPVHSMTSDKNSDNISVHLGNRKSGDPDNISQCSSIYHHERGFSSMSAEEGSSGNVKKQSTLSHGGLATASPLVGLPEFSHLGWGHWFTLRDLEMATKRFSAENIIGEGGYGVVYKGILINGIEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGNMHQHGTLTWEARLKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESYITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGTRRAEEVVDSNLEVKPPLRALKRTLLVALRCIDPDADKRPKMSQVVRMLEADEYPYREDRRNRKSGTVNMEIETVKDISGPSDAERMKDRN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02723 501 CDD STKc_IRAK 194 460 - -
Viun8g02723 501 PANTHER OS01G0323000 PROTEIN 1 478 - -
Viun8g02723 501 FunFam Putative receptor-like protein kinase 170 263 - -
Viun8g02723 501 SUPERFAMILY Protein kinase-like (PK-like) 172 461 IPR011009 -
Viun8g02723 501 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
Viun8g02723 501 Coils Coil 208 228 - -
Viun8g02723 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Viun8g02723 501 MobiDBLite consensus disorder prediction 96 119 - -
Viun8g02723 501 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Viun8g02723 501 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02723 501 MobiDBLite consensus disorder prediction 467 501 - -
Viun8g02723 501 Gene3D Transferase(Phosphotransferase) domain 1 264 477 - -
Viun8g02723 501 Pfam Protein kinase domain 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02723 501 FunFam Putative receptor-like serine/threonine-protein kinase 264 474 - -
Viun8g02723 501 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02723 Viun-Chr8 35994070 35998906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02723 19 462 Trihelix Transcription Factor Family AT1G70460 40.089 8.68e-96 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Viun8g02723 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02723 - - gmx:100778444 936.791