Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02703 ATGGATGTGGCCAAGTTACATAACTCCGATGAAGATGAGAAGAAAGAAGATGAAGTTGTGCTTCCAGGGTTCAGATTCCATCCGACAGACGAAGAGCTTGTGGGGTTTTATCTGAGGCGAAAGGTGGAGAAGAAGCCTCTCAGAATTGAACTCATCAAACAGATTGACATCTACAAATATGATCCATGGGATCTTCCAAAAGCAAGTTCTGTGGGGGAGAAGGAGTGGTACTTCTTCTGCATAAGAGGGAGAAAGTACAGAAACAGTATAAGGCCTAACAGAGTAACAGGTTCTGGGTTTTGGAAAGCCACAGGGATTGATAAACCAATATACTGTGTTAAAGAACCTCATGAATGCATTGGGTTGAAGAAATCATTGGTGTATTACCGTGGAAGTGCTGGAAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCACCCAATGGAAAATCCACCACTAACACACAACCTAATGACATTCAAGAAGCTGAAGTGTGGACGCTATGTCGAATATTCAAACGAGTCCCATCTTACAAGCGGTACACACCAAATTTGAAAGACTCAAACACAGCACCAATCACGAAGTCTTCAAGTTCCAAAACATGCAGTTTAGAATCTGACACCAGCAAGCCATGCTTGACTTTCACAAACTCACCATCATCACTGCTCCTTCAGCAAAACCAAATGATGATGAAACCAGTTTTTGGACATGTTGAACAACAGCCTCCCACAACCTTTTCTTACTCCAGTTTTTGGAACCATCATCAGAATCTGGAATTGCCTCATGACAATTGGGATGATCTCACTTCTGTGGTTCAGTTTGCTGTTGATCCATCCAGCCTTTCTCATCACTGTAAAGAGTTTAATACATTTTGA 885 0.4203 MDVAKLHNSDEDEKKEDEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKQIDIYKYDPWDLPKASSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKEPHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKSTTNTQPNDIQEAEVWTLCRIFKRVPSYKRYTPNLKDSNTAPITKSSSSKTCSLESDTSKPCLTFTNSPSSLLLQQNQMMMKPVFGHVEQQPPTTFSYSSFWNHHQNLELPHDNWDDLTSVVQFAVDPSSLSHHCKEFNTF 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02703 294 ProSiteProfiles NAC domain profile. 20 177 IPR003441 GO:0003677|GO:0006355
Viun8g02703 294 FunFam NAC domain-containing protein 35 29 180 - -
Viun8g02703 294 Pfam No apical meristem (NAM) protein 22 148 IPR003441 GO:0003677|GO:0006355
Viun8g02703 294 Gene3D NAC domain 29 180 IPR036093 GO:0003677|GO:0006355
Viun8g02703 294 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 243 - -
Viun8g02703 294 SUPERFAMILY NAC domain 18 176 IPR036093 GO:0003677|GO:0006355
Viun8g02703 294 MobiDBLite consensus disorder prediction 191 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02703 Viun-Chr8 35858335 35860871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02703 14 178 NAC Transcription Factor Family AT5G39820 60.556 1.01e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun8g02703 NAM 4.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02703 - - gmx:100784323 473.396