Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02702 ATGGCAAAACACTGTGAGGAAGAAGAGTGTGTCGGTTTCAGGTACGATGTGTTCATTAGTTTCAGAGGCGAAGATACTAGAAGCAATTTTGTAGGGCATCTCCGTAGAGAGTTGGGTATGAAGGGAATGAAGAGTTTCAATGATGACAGGGATATGGCGATAGGGGAAAGTCTTTCACCTGCTCTGAAAAAGGCCATCGAAGAATCTAGGGTTTTCATCGTTGTGTTTTCTGAGAACTATGCATCTTCCACATGGTGTCTGGATGAACTTGTTAGGATCATGGAACTGAGGGAGAAGAAGCAGAAGCAAGTTGTTTTGCCAGTGTTCTACCATGTAGATCCATCAGATATAGTGCAAGAGAGAAATAGCTTCGGAAAACACATGAAGGCACGTGAAAATAAGTTTGGAAAAGAGTCGCAAATAATGCAGGATTGGAGATCTGCTTTGTCTGAAGCAGTTAACTTGCCATGGAAGCATATTATTACCACCGGGTGTGAAAACAATTTTATTAAAGAAATTGTTGGGGACATCCACAAGTATATAGGTCCTAAACCTTTATATACGGGTCAGAACCCTCTTGGACTTGAGTCCAACATAGAAGAGGTTATGTCACTTTTGGACATGAAGCCTGATGACAACACTGTAAGAATGTTGGGCATATATGGACTTGGTGGAATTGGAAAAACGGAACTTGCCAAAGCTTTGTATGACAACATTGTTCAACACTTTGATGCTGCAAGTTTTCTTGCTGGTGTTAGAGAAAAATCAAACACAATCAATGGCATGGAAGATCTACAGAAGACACTTTTATCTGAGATGTTAGAGGAGTCAGAAACTAAGTTGGGAAGTAGCAGTAAAGGAATATATCAAATAAAACAAAAGCTTCGCCGAAAGAAAGTTCTTTTGGTTCTTGACGACGTTGATGATAAAAAGGAGTTAGAAAAGCTGGCAGGATGGTGTGATTGGTTTGGTCCTGGTAGTAGGATCGTTATAACGACAAGGGAAAAGGATGTGCTAATTGCTCACCATGTTAAAAATATTTATGAAATGAAAGAACTCGATGAACAACATTCTTTGAAGCTCTTTTGTTGGAATGCATTCGGACAAGGATATCCTAAACCAGGTTTTCAAGATGTGTCCGTGAGAGCGGTAGATTACGCCAAAGGACTTCCACTGGCTTTAAAAGTGATAGGCTCTGATTTAGCTATTCATGGAGCAAGTTTAGAAGCTTGGGGAGATGCATTGGAAGAATATGAGAAAACTCCTCCAAATAAAAAGATTCAAGATGTGCTTAAAATAAGCTACGATAGATTGGATAATGATGCCAAACAAGTTTTCTTGGACATAGCTTGCTTCTTTAAAGGGGAGAGAAAGGAATACGTGAACAAGATACTTGAGGAATTTCGTTCAGCTCACAAAATGGAAGAGCTTGTTAATAAATCTCTCATAACTATCGAGAATGGCTTCCTGAAGATGCATGATCTAATACAAGATATGGGTAGAGAGATTGTTAGGCAGGAAGCACCAAATAATCCTGGTGAACGTAGCAGAGTATGGGATTTTGAAGATGTTCTTGAAATACTAAACGAAGATTCTGGAAGTGACAAGATTCAAGGGATTATGCTTGATCCCCCTCAGGAAGAAAAGGTAAATTGGAGTGGTACTGAGTTTGAGAAGATGAAATGGCTCAGAATTCTTATCGTCCGAAACACATCCTTTTCATCTGAACTTCAACATTTACCAAATCATCTAAGACTGCTTCACTGGGAGAACTATCCTTCAAAGTCTTTCCCACCAAAATTTCATCCAAAGAAAATCGTTGTCTTCAATTTACCTAGAAGTCGTCTAACATTCCAAGAGCCATTCAAGAAATTTCCATGCTTGACCAATATGGACTTTTCGTATAACCAATGTATAACTGAAATACCTGATGTGTCCGAACTTCAGAATCTAAGAGAAATGAGACTTGATCATTGTAGAAACCTAATTGCAGTCCATGAATCTGTTGGAGTTCTAAAAAGGCTTGCGCACTTAAATCTTTCAGAATGCAGAAAACTTCAAAATTTCATGTCCAGAATGTTTCTGCCATCTCTAGAGATCTTTAACCTTAACTTTTGTGAAAGCCTTGGTCACTTCCCAGAGATAACGAAAGAAATGACAAAGCCATTGAAGATTTATATGACAAATACGGGTATTCAAGAGCTTCCAGAATCCGTTAGTAAACTTACTGAGCTTGTTTCCTTAGACATATCGAATAACAGGAAACTTAAATATCTACCAAGCAGCTTATTCATGTTGCCAAAATTAGAAGAATTGATTGCTTCAGAAAACAATTTTGTATCTATTCCTTCATGCATCAAGGAATGTGGTGACAGGGCAAGTCTCGATTTGAATGGATGTAAGAAGCTTAATAAAGTTCCTGAACCCACCAGCTTGAGAATTCTTGATGTTCATGACTGTTTGCATCTTGAAGAAATTTCAGAGTTGTCGTCGACTGTTCAGAAAGTAAATGCAAGATCTTGTTTCAAGTTAACAGAAGAAACATCAGACATGCTATGGTGTCAGGTGAAGAAAGGGGTTGGTGGAATAGAAATGGTGATGCCATTTACAACTGAAATTCCAAAATGGTTTAACTTCGTGGGAGTGGAAAGTATTCCTCATTTCTGGGTTCGTGGGAAGTTCCCTAACATTGTTGTAGCCATGATCTTCCACTTCCAAAATCCAAGTGAAAGGGAATATGGTTTCCGTCAACTTGTTGATCTCCGTTTACTTATCAACGGTCGATATGTTCCTCGGAAAGGGTATCAGCACTTTAGAATTGAAGCAGAACACATGTTGGTGTGTGATTTACGAGTTTTGTGCAGTGAGGAGGAGTGGTTTGGCCTTGATGGACTTCTGGGGAATGAGTGGAATCTGGTTGAGGTTGCGTGTGATGCCACTTGGAGCTTGACGATAAGTGGTTGGGGTGCTTTTGTGTATGAAGAAGGAAGCAACATGGAAGATCTCCTATTCACTTGTCCCCTTGAGAACGAAAATGAGCTTCATGATCTGAAAGGAACAGCGATTGAAATATTATATGAAGGAATAAGAGATGGACTTTTTGAGGCACGGAATAGATTTCCTTCTCTGGATATTGTTGAAATCTTTACCGCAACCTTGGAGAAGGGTCCTAGGATGTTATGGACAGCTGAAGGGATGGAGCTAATACCGACAGCTGAAAATAGGACATACTTCACTGGAGTTCAAGCTGGACTCTTGGAAGCAAATCGGAGATTTCCTGATTTGGACGTGGGGGCAACACTGAGTACTGTAGCAAATAGGAAAGGGATTAAAGGAGATTTTAAAACACCCTTACAAGAAAAAATGAGGATTCCTCATTTGGATTGGACTACAGTGACACTTCCTCCCTCTCACGACCCTCTCATGCAAATATACATGATGATGATGAAGCAGCAGAGTTCTTCGGAATCCGAGCTCAAAACTAAAACCCTGTGGAAGTTGAAGGAGAGCCACCAAGTTCTGCGCAACGGACTTGCACTACGTGAAAATGCTGCTCAGAACGCACCCAGCTGTTCCAAAAATCGATATGATGAACTGATTCAGAAATTCCACATCCAATATGATGCGTTGGTTGGGAAGAGAGTAGACAGGGTTTATGGTGTGGCAAAGTACGAAAATGATAGTGTTGTTTTGAAAGAAAGAGTGAAAGAAATAGAGAGGGTATTCAATGGTGTGGTTGAGAGGCTCCAGAATTCAGAGGAGTTTGAAGATGTAATGACTGCAATGTTCTTGAATGGACTCAGGGATGGAGTCCTTGAAGCACGGGCCATTTTACTTGCTCTCTGCACCCACACACAAGCTCATGAAAGTGTCACTGATGAGGCTACTAATAATCAAAACATTTCCTAG 3909 0.4011 MAKHCEEEECVGFRYDVFISFRGEDTRSNFVGHLRRELGMKGMKSFNDDRDMAIGESLSPALKKAIEESRVFIVVFSENYASSTWCLDELVRIMELREKKQKQVVLPVFYHVDPSDIVQERNSFGKHMKARENKFGKESQIMQDWRSALSEAVNLPWKHIITTGCENNFIKEIVGDIHKYIGPKPLYTGQNPLGLESNIEEVMSLLDMKPDDNTVRMLGIYGLGGIGKTELAKALYDNIVQHFDAASFLAGVREKSNTINGMEDLQKTLLSEMLEESETKLGSSSKGIYQIKQKLRRKKVLLVLDDVDDKKELEKLAGWCDWFGPGSRIVITTREKDVLIAHHVKNIYEMKELDEQHSLKLFCWNAFGQGYPKPGFQDVSVRAVDYAKGLPLALKVIGSDLAIHGASLEAWGDALEEYEKTPPNKKIQDVLKISYDRLDNDAKQVFLDIACFFKGERKEYVNKILEEFRSAHKMEELVNKSLITIENGFLKMHDLIQDMGREIVRQEAPNNPGERSRVWDFEDVLEILNEDSGSDKIQGIMLDPPQEEKVNWSGTEFEKMKWLRILIVRNTSFSSELQHLPNHLRLLHWENYPSKSFPPKFHPKKIVVFNLPRSRLTFQEPFKKFPCLTNMDFSYNQCITEIPDVSELQNLREMRLDHCRNLIAVHESVGVLKRLAHLNLSECRKLQNFMSRMFLPSLEIFNLNFCESLGHFPEITKEMTKPLKIYMTNTGIQELPESVSKLTELVSLDISNNRKLKYLPSSLFMLPKLEELIASENNFVSIPSCIKECGDRASLDLNGCKKLNKVPEPTSLRILDVHDCLHLEEISELSSTVQKVNARSCFKLTEETSDMLWCQVKKGVGGIEMVMPFTTEIPKWFNFVGVESIPHFWVRGKFPNIVVAMIFHFQNPSEREYGFRQLVDLRLLINGRYVPRKGYQHFRIEAEHMLVCDLRVLCSEEEWFGLDGLLGNEWNLVEVACDATWSLTISGWGAFVYEEGSNMEDLLFTCPLENENELHDLKGTAIEILYEGIRDGLFEARNRFPSLDIVEIFTATLEKGPRMLWTAEGMELIPTAENRTYFTGVQAGLLEANRRFPDLDVGATLSTVANRKGIKGDFKTPLQEKMRIPHLDWTTVTLPPSHDPLMQIYMMMMKQQSSSESELKTKTLWKLKESHQVLRNGLALRENAAQNAPSCSKNRYDELIQKFHIQYDALVGKRVDRVYGVAKYENDSVVLKERVKEIERVFNGVVERLQNSEEFEDVMTAMFLNGLRDGVLEARAILLALCTHTQAHESVTDEATNNQNIS 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02702 1302 Gene3D - 185 348 IPR027417 -
Viun8g02702 1302 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Viun8g02702 1302 Gene3D - 352 439 IPR042197 -
Viun8g02702 1302 ProSiteProfiles TIR domain profile. 13 153 IPR000157 GO:0007165
Viun8g02702 1302 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 182 - -
Viun8g02702 1302 Pfam TIR domain 15 177 IPR000157 GO:0007165
Viun8g02702 1302 Gene3D Ribonuclease Inhibitor 721 833 IPR032675 -
Viun8g02702 1302 Coils Coil 1221 1241 - -
Viun8g02702 1302 Gene3D - 13 183 IPR035897 -
Viun8g02702 1302 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 824 IPR044974 GO:0006952
Viun8g02702 1302 Gene3D Ribonuclease Inhibitor 549 720 IPR032675 -
Viun8g02702 1302 SUPERFAMILY "Winged helix" DNA-binding domain 425 528 IPR036390 -
Viun8g02702 1302 SUPERFAMILY L domain-like 540 846 - -
Viun8g02702 1302 SMART till_3 14 155 IPR000157 GO:0007165
Viun8g02702 1302 PRINTS Disease resistance protein signature 740 756 - -
Viun8g02702 1302 PRINTS Disease resistance protein signature 217 232 - -
Viun8g02702 1302 PRINTS Disease resistance protein signature 387 401 - -
Viun8g02702 1302 PRINTS Disease resistance protein signature 294 308 - -
Viun8g02702 1302 Pfam NB-ARC domain 196 435 IPR002182 GO:0043531
Viun8g02702 1302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 449 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02702 Viun-Chr8 35845432 35852998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02702 15 838 WRKY Transcription Factor Family AT4G12020 31.412 8.71e-104 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02702 - - var:108338187 1828.14