Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02603 ATGAAACAGGGAAGAGGGAGAAGAAGCTGTTTTCATCCTATGTCATCACTTCTCTCTTGTCTTCTCCTTTTCTTCTTCTGTCTCTTAGGATCTGCTCATGCTTACAAGAACTACACTGTGGGAGACTCCTTAGGCTGGTTTGACAACACTGAGAAATCCAATGTCAATTACCAGAAATGGGCTGATACTAAACAATTCACCTTAGGAGATTTCCTCATTTTCAACACAGACACTAACCACTCTGTGGTTCAGACATACAACTTTACGACATACAAAGAATGTGATTACGATGATGCTCAAGACAAAGACACAACGCAGTGGTCGGCATCTGATCCATCCAACACCCAAACACATCCTGTGACAGTGGCGATTCCTCTGATGAAGGAGGGAAAAACGTACTTTTTTTCTGGTGATTATGATGGTGATCAGTGCAGGAGTGGACAACACTTCCAGATAAATGTGACCTATGGAGAAGGGTTACCCAAAAGTCTGAAAGCCCCAGAAGATGCTCCATCTCCTGCTGGTGCTGTTTCTGGAGATGATGATTCAGCACCAGACACTATTGTCCCTGCCAACTTCAACCACCCCAAAGATGAAGAAAGTGATGATGATGACAAAGCTAGTGACAAACAAAACTCTACTTCTTTCTCAGTTTCAGTGTCTGCACAACTTCACGTTGTCCTATTAGGGACGCTGCTTTTCTTCCTTTGA 711 0.4332 MKQGRGRRSCFHPMSSLLSCLLLFFFCLLGSAHAYKNYTVGDSLGWFDNTEKSNVNYQKWADTKQFTLGDFLIFNTDTNHSVVQTYNFTTYKECDYDDAQDKDTTQWSASDPSNTQTHPVTVAIPLMKEGKTYFFSGDYDGDQCRSGQHFQINVTYGEGLPKSLKAPEDAPSPAGAVSGDDDSAPDTIVPANFNHPKDEESDDDDKASDKQNSTSFSVSVSAQLHVVLLGTLLFFL 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02603 236 MobiDBLite consensus disorder prediction 193 210 - -
Viun8g02603 236 SUPERFAMILY Cupredoxins 36 154 IPR008972 -
Viun8g02603 236 Gene3D - 34 156 IPR008972 -
Viun8g02603 236 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Viun8g02603 236 ProSiteProfiles Phytocyanin domain profile. 36 156 IPR003245 GO:0009055
Viun8g02603 236 Pfam Plastocyanin-like domain 46 148 IPR003245 GO:0009055
Viun8g02603 236 CDD Phytocyanin 36 154 - -
Viun8g02603 236 FunFam Early nodulin-like protein 18 35 157 - -
Viun8g02603 236 PANTHER BLUE COPPER PROTEIN 35 201 IPR039391 GO:0009055
Viun8g02603 236 MobiDBLite consensus disorder prediction 161 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02603 Viun-Chr8 35227417 35229369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02603 15 206 Phytocyanin Superfamily AT1G08500 63.265 4.56e-87 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02603 - - gmx:100526961 389.423