Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02602 ATGGCTTCCATAGCGGAACAACCCAACAATGGTGAGATTCGTGAGAACAAGCAGAAGAATATGGGTGGTGAAGGAAGAAACAGAAGGGTTCTTCAGGATATTGGGAATCTTGTGGCCAAACAAGGCCATGTTGGTATTAATGTGTCTAAACCTGTCGCAAGGAATTTTCGTGCCCAATTGTTGGCCAATGCACAGGACAAGAACAAGAAGTCAAGCACTGAAGTGGAGAATGCTGCGGTGGTAGCAAAGGCAAAGGCGAAGGCAACTCAGAAGCCTAAAGAAGAACCTGAAGTGATAGTCATTAGCTCTGATGATGAATCGGAGGAAAAGGAGGAGTATGTTCCTAAAGCAAACAAGGCAAGGGACAAAGATGCCAAGGCATTTAGTTCAGTCCTCTCTGCTCGAAGCAAGGCTGCTTGTGGACTCCCAAGGGAACCGGTCGTGAACATTGATGAAACTGATAATGACAATGAATTGGCAGCATTGGACTATATTGATGATATCTATGAATTTTACAAAAATACTGAGAAAGATGGTTGTGTGCATGATTACATGGGTTCACAACCAGATATTAATGCCAAGATGAGATCCATCCTTGTGGACTGGTTGATAGAAGTGCATAGAAAGTTTGAGCTCATGCCAGAAACTCTCTACTTGACCATGAACATTGTTGATCGGTTCCTGTCTGTGAAGGCCGTGCCCAGAAGGGAGCTTCAGCTTGTTGGTATCAGCTCCATGCTGCTAGCCTCAAAATATGAAGAGATATGGGCACCAGAGGTTAATGACTTTGTGTGCATATCAGACAATGCTTATGTCAGTGCACAAGTGCTGATGATGGAGAAAACAATCCTTAGGAAGCTTGAGTGGTACTTAACGGTTCCAACACCCTATGTGTTCTTGGTTCGGTACATCAAAGCCTCCACTCCATCTGATGAAGAGATGGAATATATGGTGTTTTTCCTTGCTGAACTTTCTATGATGCACTATCCTACGGTAGTCTTGCACTGCCCTTCTTTGATTGCTGCTTCTGCTGTGCTTGCGGCTCGATGCACTCTTCAAAGAACTCCATTCTGGACAAGCACATTGAAGCATTACACAGGCTACTCTGAGGAGCAACTAAGGGATTGCGCCAAAATCCTGGTGAACCTTCATGCGACTGCTGCAGAAAGTAAGCTTAGGGCAGTTTACAAGAAATACAGCAGCTCAGATTGCTGCTGTGTTGCTCTTCGTTCTCCAGCAAAAAACATGACCTCACTGTCTTAA 1263 0.4458 MASIAEQPNNGEIRENKQKNMGGEGRNRRVLQDIGNLVAKQGHVGINVSKPVARNFRAQLLANAQDKNKKSSTEVENAAVVAKAKAKATQKPKEEPEVIVISSDDESEEKEEYVPKANKARDKDAKAFSSVLSARSKAACGLPREPVVNIDETDNDNELAALDYIDDIYEFYKNTEKDGCVHDYMGSQPDINAKMRSILVDWLIEVHRKFELMPETLYLTMNIVDRFLSVKAVPRRELQLVGISSMLLASKYEEIWAPEVNDFVCISDNAYVSAQVLMMEKTILRKLEWYLTVPTPYVFLVRYIKASTPSDEEMEYMVFFLAELSMMHYPTVVLHCPSLIAASAVLAARCTLQRTPFWTSTLKHYTGYSEEQLRDCAKILVNLHATAAESKLRAVYKKYSSSDCCCVALRSPAKNMTSLS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02602 420 Pfam Cyclin, C-terminal domain 294 409 IPR004367 -
Viun8g02602 420 SUPERFAMILY Cyclin-like 156 291 IPR036915 -
Viun8g02602 420 Gene3D - 167 408 - -
Viun8g02602 420 PANTHER CYCLINS 112 405 IPR039361 -
Viun8g02602 420 Gene3D - 181 292 - -
Viun8g02602 420 CDD CYCLIN_AtCycB-like_rpt1 145 289 - -
Viun8g02602 420 ProSitePatterns Cyclins signature. 196 227 IPR006671 -
Viun8g02602 420 FunFam G2/mitotic-specific cyclin-1 282 408 - -
Viun8g02602 420 SUPERFAMILY Cyclin-like 295 414 IPR036915 -
Viun8g02602 420 SMART Cyclin_C_2 294 413 IPR004367 -
Viun8g02602 420 Pfam Cyclin, N-terminal domain 167 291 IPR006671 -
Viun8g02602 420 PIRSF Cyclin_A_B_D_E 2 420 IPR046965 GO:0016538|GO:0044772
Viun8g02602 420 MobiDBLite consensus disorder prediction 1 16 - -
Viun8g02602 420 SMART cyclin_7 298 382 IPR013763 -
Viun8g02602 420 SMART cyclin_7 201 285 IPR013763 -
Viun8g02602 420 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02602 Viun-Chr8 35213994 35216771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02602 1 409 Core Cell Cycle Gene Families AT2G26760 53.511 1.60e-146 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02602 K21777 - gmx:547782 617.846