Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02584 ATGCAAGCTGATGAGGATGTAGGGAAGATTGCAATGGCTGTGCCTCTTTTAGTTTCTAAAGCACTAGAGCTATTTCTACAAGATTTGTGTGATCGAACATATGAGATAACTTTGAGGAGGGGAGCCAAGACTATGAATGCTTTTCATTTAAAACAGTGTGTGCAGACCTTTAACGTCTTTGACTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGTGGTTCTGTTGCAAATGGTGATGACCACACTGTCAAGAGGAGGAAAGTTGCTGAAGATGATAATGATAGCCACGAGGAGCCCAAAAGAAATAACAAGGCGGAGCCGGGACAAACCAGCGGCAGAGGAAGGGGTAGGGGAAGAGGAAGGGGTAGGGGCAGAGGAAGTAGAAATGTAGTAGATCAAGAGATGAGTTCACAAGCCAAGTGTGAAGAAGATTCTGAGGCATTGAAGCAAAATGAAAAGCAGAGTCAAAGCAATGAAAGCATGGAAAACGCATCATCACCTGAAGAAGTTAAGCAGAGTTTTCCGGTGAGCAAGCCGGCTCAGGTGTCGATTCGAAATTTTGACTTAAACATGGACCCAGATGAGAATATGGAATCGTTAACATCACCAACTGCTGTTCCAACCAGTTCATCAGCAAAATCAATATCAGAAGAGAAACATCATGAGGAATATCCTGGATGGTCCTTGTCTGATATGGAAAAAATGTCCATTGATCCCATTCAACTAGCTAACATAAATGGAAGGATTGATGAAGATGAAGAGGATTATGATGAAGAAATGTAA 789 0.4195 MQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGGSVANGDDHTVKRRKVAEDDNDSHEEPKRNNKAEPGQTSGRGRGRGRGRGRGRGSRNVVDQEMSSQAKCEEDSEALKQNEKQSQSNESMENASSPEEVKQSFPVSKPAQVSIRNFDLNMDPDENMESLTSPTAVPTSSSAKSISEEKHHEEYPGWSLSDMEKMSIDPIQLANINGRIDEDEEDYDEEM 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02584 262 SUPERFAMILY Histone-fold 1 71 IPR009072 GO:0046982
Viun8g02584 262 MobiDBLite consensus disorder prediction 153 186 - -
Viun8g02584 262 MobiDBLite consensus disorder prediction 81 106 - -
Viun8g02584 262 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 142 - -
Viun8g02584 262 MobiDBLite consensus disorder prediction 216 230 - -
Viun8g02584 262 MobiDBLite consensus disorder prediction 197 215 - -
Viun8g02584 262 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 54 IPR003958 -
Viun8g02584 262 MobiDBLite consensus disorder prediction 72 232 - -
Viun8g02584 262 Gene3D Histone, subunit A 1 69 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02584 Viun-Chr8 35046946 35050659 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02584 1 251 CCAAT-HAP5 Transcription Factor Family AT3G12480 42.391 9.21e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Viun8g02584 CBFD_NFYB_HMF 2.3e-11 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02584 K21752 - gmx:100814800 381.719