Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02568 ATGGCTATTGCAGCTCCAGGGCAATTGAACGTTAATGAATCGCCCACTTGTGGATCCAGAAGTGTCGATTGCTTCGAGAAACTGGAGCAAATTGGCGAAGGCACATATGGTCAGGTTTACATGGCTAAAGAGATCAAAACTGGTGAAATTGTTGCTCTGAAGAAAATACGTATGGACAATGAGAGAGAGGGGTTTCCTATAACTGCTATACGAGAAATCAAAATTCTTAAGAAACTACATCATGAAAATGTGATCAAGCTGAAAGAAATTGTGACTTCTCCAGGTCCTGAGAAAGATGAACAGGGGAGGCCAGATGGTAACAAATATAGAGGTGGCATCTATATGGTCTTTGAATACATGGACCACGATTTAACTGGCCTTGCTGACCGACCTGGGATGAGATTTACAGTTCCCCAAATTAAATGTTACATGAGACAACTGTTGACGGGGCTTCACTATTGTCATGTAAATCAAGTACTCCATCGTGATATCAAAGGCTCAAATCTTCTTATAGACAATGAGGGAAACCTTAAGCTTGCAGATTTTGGACTAGCACGATCATTTTCTAATGACCAAAATGCTAATCTTACAAATCGTGTCATTACATTATGGTACAGACCTCCTGAGTTGCTGCTTGGGACAACAAAGTATGGGCCTGCTGTAGATATGTGGTCAGTTGGGTGCATTTTTGCTGAGCTTCTTCAGGGGAAGCCTATCTTTCCTGGAAAAGATGAGCCAGAACAATTAAATAAAATATATGAGCTGTGTGGAGCACCAACTGAAATCAACTGGCCTGGGGTTTCTAAGATACCTTATTATAATAAATTTATGCCAACAAGGCCAATGAAAAGACGTTTGAGGGAAGTTTTCCGGCATTTTGATCATCATGCTCTCGAGTTGTTGGAGAAGATGTTGACACTTGATCCAGCACAGAGAATTACTGCGAAAGATGCACTTGATGCTGAGTATTTCTGGACAGATCCATTACCATGTGACCCCAAGAGTTTACCCAAGTACGAGTCATCACATGAGTTTCAGACAAAGAAAAAGCGCCAACAACAACGGCAAAATGAAGAAATGGCTAAGCGTCAGAAAATGCAGCACCCACAGCAGCACAGTCGTCTTCCCCCCATTCAGCAGCCCGGACAACATGGTCAAATGCGGTCAGGACCAAACCAACAGATTCATGGCTCTCAACCCCCAGTTGCTGCAGGACCTACTCATCATTATGGCAAGCCTAGAGGTCCATCTGGTGGACCAGGAAGATATCCTCCCAATGGAAACCAAGGCGGAGGATACAATCACCCAAATCGAGGAGGTCAAGGTGGTGGTTATGGCACGGGACCTTATCCTCCCCAAGGGCGGGGTGCACCTTATGGGTCCAATAACATGCCTAGTGGTGGTCCCCGTGGTGGCGGTGGTGGTGGTGGCGGCGGGGGCAGTGGCTATGGAGTTGGAGCTCCAAATTATCCCCAACAAGGTGGTCCATATGGGGGTTCGGCAGCTGGTCGTGGCTCAAACATGATGGGTGGAAACCGCAATCAACAGCAGTATGGTTGGCAGCAGTAA 1569 0.4576 MAIAAPGQLNVNESPTCGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPDGNKYRGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDQNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLQGKPIFPGKDEPEQLNKIYELCGAPTEINWPGVSKIPYYNKFMPTRPMKRRLREVFRHFDHHALELLEKMLTLDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEMAKRQKMQHPQQHSRLPPIQQPGQHGQMRSGPNQQIHGSQPPVAAGPTHHYGKPRGPSGGPGRYPPNGNQGGGYNHPNRGGQGGGYGTGPYPPQGRGAPYGSNNMPSGGPRGGGGGGGGGGSGYGVGAPNYPQQGGPYGGSAAGRGSNMMGGNRNQQQYGWQQ 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02568 522 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Viun8g02568 522 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02568 522 FunFam Cyclin-dependent kinase C-2 122 364 - -
Viun8g02568 522 CDD STKc_CDK9_like 25 324 - -
Viun8g02568 522 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02568 522 MobiDBLite consensus disorder prediction 335 522 - -
Viun8g02568 522 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Viun8g02568 522 PANTHER CELL DIVISION PROTEIN KINASE 23 330 - -
Viun8g02568 522 MobiDBLite consensus disorder prediction 370 400 - -
Viun8g02568 522 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun8g02568 522 MobiDBLite consensus disorder prediction 507 522 - -
Viun8g02568 522 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Viun8g02568 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Viun8g02568 522 MobiDBLite consensus disorder prediction 337 366 - -
Viun8g02568 522 FunFam Cyclin-dependent kinase C-2 12 121 - -
Viun8g02568 522 SUPERFAMILY Protein kinase-like (PK-like) 20 332 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02568 Viun-Chr8 34976047 34981147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02568 1 522 Core Cell Cycle Gene Families AT5G10270 75.568 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Viun8g02568 Pkinase 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02568 K08819 - gmx:100795971 898.271